Literature DB >> 11096098

Porphyromonas gingivalis DPP-7 represents a novel type of dipeptidylpeptidase.

A Banbula1, J Yen, A Oleksy, P Mak, M Bugno, J Travis, J Potempa.   

Abstract

A novel dipeptidylpeptidase (DPP-7) was purified from the membrane fraction of Porphyromonas gingivalis. This enzyme, with an apparent molecular mass of 76 kDa, has the specificity for both aliphatic and aromatic residues in the P1 position. Although it belongs to the serine class of peptidases, it does not resemble other known dipeptidylpeptidases. Interestingly, the amino acid sequence around the putative active site serine residue shows significant similarity to the C-terminal region of the Staphylococcus aureus V-8 endopeptidase. The genes encoding homologues of DPP-7 were found in genomes of Xylella fastidiosa, Shewanella putrefaciens, and P. gingivalis. It is likely that at least in P. gingivalis, DPP-7 and its homologue, in concert with other di- and tripeptidases, serve nutritional functions by providing dipeptides to this asaccharolytic bacterium.

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Year:  2000        PMID: 11096098     DOI: 10.1074/jbc.M008789200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  16 in total

1.  Degradation of Incretins and Modulation of Blood Glucose Levels by Periodontopathic Bacterial Dipeptidyl Peptidase 4.

Authors:  Yuko Ohara-Nemoto; Manami Nakasato; Yu Shimoyama; Tomomi T Baba; Takeshi Kobayakawa; Toshio Ono; Takashi Yaegashi; Shigenobu Kimura; Takayuki K Nemoto
Journal:  Infect Immun       Date:  2017-08-18       Impact factor: 3.441

2.  Crystallization and preliminary X-ray crystallographic studies of dipeptidyl peptidase 11 from Porphyromonas gingivalis.

Authors:  Yasumitsu Sakamoto; Yoshiyuki Suzuki; Ippei Iizuka; Chika Tateoka; Saori Roppongi; Mayu Fujimoto; Hiroaki Gouda; Takamasa Nonaka; Wataru Ogasawara; Nobutada Tanaka
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-01-28       Impact factor: 1.056

3.  Crystallization and preliminary X-ray crystallographic studies of dipeptidyl aminopeptidase BII from Pseudoxanthomonas mexicana WO24.

Authors:  Yasumitsu Sakamoto; Yoshiyuki Suzuki; Ippei Iizuka; Chika Tateoka; Saori Roppongi; Hirofumi Okada; Takamasa Nonaka; Yasushi Morikawa; Kazuo T Nakamura; Wataru Ogasawara; Nobutada Tanaka
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-01-21       Impact factor: 1.056

4.  Identification and characterization of prokaryotic dipeptidyl-peptidase 5 from Porphyromonas gingivalis.

Authors:  Yuko Ohara-Nemoto; Shakh M A Rouf; Mariko Naito; Amie Yanase; Fumi Tetsuo; Toshio Ono; Takeshi Kobayakawa; Yu Shimoyama; Shigenobu Kimura; Koji Nakayama; Keitarou Saiki; Kiyoshi Konishi; Takayuki K Nemoto
Journal:  J Biol Chem       Date:  2014-01-07       Impact factor: 5.157

5.  Asp- and Glu-specific novel dipeptidyl peptidase 11 of Porphyromonas gingivalis ensures utilization of proteinaceous energy sources.

Authors:  Yuko Ohara-Nemoto; Yu Shimoyama; Shigenobu Kimura; Asako Kon; Hiroshi Haraga; Toshio Ono; Takayuki K Nemoto
Journal:  J Biol Chem       Date:  2011-09-06       Impact factor: 5.157

6.  A Porphyromonas gingivalis Periplasmic Novel Exopeptidase, Acylpeptidyl Oligopeptidase, Releases N-Acylated Di- and Tripeptides from Oligopeptides.

Authors:  Takayuki K Nemoto; Yuko Ohara-Nemoto; Gustavo Arruda Bezerra; Yu Shimoyama; Shigenobu Kimura
Journal:  J Biol Chem       Date:  2016-01-05       Impact factor: 5.157

7.  Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.

Authors:  Yasumitsu Sakamoto; Yoshiyuki Suzuki; Ippei Iizuka; Chika Tateoka; Saori Roppongi; Mayu Fujimoto; Koji Inaka; Hiroaki Tanaka; Mitsugu Yamada; Kazunori Ohta; Hiroaki Gouda; Takamasa Nonaka; Wataru Ogasawara; Nobutada Tanaka
Journal:  Sci Rep       Date:  2015-06-09       Impact factor: 4.379

8.  Phenylalanine 664 of dipeptidyl peptidase (DPP) 7 and Phenylalanine 671 of DPP11 mediate preference for P2-position hydrophobic residues of a substrate.

Authors:  Shakh M A Rouf; Yuko Ohara-Nemoto; Toshio Ono; Yu Shimoyama; Shigenobu Kimura; Takayuki K Nemoto
Journal:  FEBS Open Bio       Date:  2013-03-28       Impact factor: 2.693

9.  Identification of the catalytic triad of family S46 exopeptidases, closely related to clan PA endopeptidases.

Authors:  Yoshiyuki Suzuki; Yasumitsu Sakamoto; Nobutada Tanaka; Hirofumi Okada; Yasushi Morikawa; Wataru Ogasawara
Journal:  Sci Rep       Date:  2014-03-06       Impact factor: 4.379

10.  S46 peptidases are the first exopeptidases to be members of clan PA.

Authors:  Yasumitsu Sakamoto; Yoshiyuki Suzuki; Ippei Iizuka; Chika Tateoka; Saori Roppongi; Mayu Fujimoto; Koji Inaka; Hiroaki Tanaka; Mika Masaki; Kazunori Ohta; Hirofumi Okada; Takamasa Nonaka; Yasushi Morikawa; Kazuo T Nakamura; Wataru Ogasawara; Nobutada Tanaka
Journal:  Sci Rep       Date:  2014-05-15       Impact factor: 4.379

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