Literature DB >> 11062232

Automated mapping of observation codes using extensional definitions.

K A Zollo1, S M Huff.   

Abstract

OBJECTIVE: To create "extensional definitions" of laboratory codes from derived characteristics of coded values in a clinical database and then use these definitions in the automated mapping of codes between disparate facilities.
DESIGN: Repository data for two laboratory facilities in the Intermountain Health Care system were analyzed to create extensional definitions for the local codes of each facility. These definitions were then matched using automated matching software to create mappings between the shared local codes. The results were compared with the mappings of the vocabulary developers. MEASUREMENTS: The number of correct matches and the size of the match group were recorded. A match was considered correct if the corresponding codes from each facility were included in the group. The group size was defined as the total number of codes in the match group (e.g., a one-to-one mapping is a group size of two).
RESULTS: Of the matches generated by the automated matching software, 81 percent were correct. The average group size was 2.4. There were a total of 328 possible matches in the data set, and 75 percent of these were correctly identified.
CONCLUSIONS: Extensional definitions for local codes created from repository data can be utilized to automatically map codes from disparate systems. This approach, if generalized to other systems, can reduce the effort required to map one system to another while increasing mapping consistency.

Mesh:

Year:  2000        PMID: 11062232      PMCID: PMC129667          DOI: 10.1136/jamia.2000.0070586

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  8 in total

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Journal:  J Am Med Inform Assoc       Date:  1999 May-Jun       Impact factor: 4.497

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Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1992

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Authors:  S M Huff; R A Rocha; C J McDonald; G J De Moor; T Fiers; W D Bidgood; A W Forrey; W G Francis; W R Tracy; D Leavelle; F Stalling; B Griffin; P Maloney; D Leland; L Charles; K Hutchins; J Baenziger
Journal:  J Am Med Inform Assoc       Date:  1998 May-Jun       Impact factor: 4.497

5.  Coupling vocabularies and data structures: lessons from LOINC.

Authors:  R A Rocha; S M Huff
Journal:  Proc AMIA Annu Fall Symp       Date:  1996

6.  Logical observation identifier names and codes (LOINC) database: a public use set of codes and names for electronic reporting of clinical laboratory test results.

Authors:  A W Forrey; C J McDonald; G DeMoor; S M Huff; D Leavelle; D Leland; T Fiers; L Charles; B Griffin; F Stalling; A Tullis; K Hutchins; J Baenziger
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7.  Mapping clinically useful terminology to a controlled medical vocabulary.

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8.  Using Logical Observation Identifier Names and Codes (LOINC) to exchange laboratory data among three academic hospitals.

Authors:  D M Baorto; J J Cimino; C A Parvin; M G Kahn
Journal:  Proc AMIA Annu Fall Symp       Date:  1997
  8 in total
  13 in total

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Authors:  S J Steindel; S E Granade
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2.  The map to LOINC project.

Authors:  Agha N Khan; Dorothy Russell; Catherine Moore; Arnulfo C Rosario; Stanley P Griffith; Jeanne Bertolli
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3.  Investigating the semantic interoperability of laboratory data exchanged using LOINC codes in three large institutions.

Authors:  Ming-Chin Lin; Daniel J Vreeman; Stanley M Huff
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4.  Interoperability of medical databases: construction of mapping between hospitals laboratory results assisted by automated comparison of their distributions.

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6.  Frequency of laboratory test utilization in the intensive care unit and its implications for large-scale data collection efforts.

Authors:  Joseph J Frassica
Journal:  J Am Med Inform Assoc       Date:  2004-11-23       Impact factor: 4.497

7.  Standardizing laboratory data by mapping to LOINC.

Authors:  Agha N Khan; Stanley P Griffith; Catherine Moore; Dorothy Russell; Arnulfo C Rosario; Jeanne Bertolli
Journal:  J Am Med Inform Assoc       Date:  2006-02-24       Impact factor: 4.497

8.  Automated mapping of local radiology terms to LOINC.

Authors:  Daniel J Vreeman; Clement J McDonald
Journal:  AMIA Annu Symp Proc       Date:  2005

9.  A multi-part matching strategy for mapping LOINC with laboratory terminologies.

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Journal:  J Am Med Inform Assoc       Date:  2013-12-20       Impact factor: 4.497

10.  Correctness of Voluntary LOINC Mapping for Laboratory Tests in Three Large Institutions.

Authors:  Ming-Chin Lin; Daniel J Vreeman; Clement J McDonald; Stanley M Huff
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13
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