Literature DB >> 21347018

Correctness of Voluntary LOINC Mapping for Laboratory Tests in Three Large Institutions.

Ming-Chin Lin1, Daniel J Vreeman, Clement J McDonald, Stanley M Huff.   

Abstract

With IRB approval, we obtained de-identified laboratory test data from 3 large institutions (ARUP, Intermountain, and Regenstrief). In this study we evaluated correctness of mapping local laboratory result codes to Logical Observation Identifier Names and Codes (LOINC®). We received 9,027 laboratory tests mapped to 3,669 unique LOINC codes. A one tenth sample (884 tests) was manually reviewed for correctness of the mappings. After review, there were 4 tests mapped to totally unrelated LOINC codes and there were 36 tests containing at least one error in mapping to the 6 axes of LOINC. The errors of LOINC mapping could be categorized into 4 systematic errors: 1) human errors, 2) mapping to different granularity, 3) lack of knowledge of the meaning of laboratory tests and 4) lack of knowledge of LOINC naming rules. Finally, we discuss how these systematic mapping errors might be avoided in the future.

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Mesh:

Year:  2010        PMID: 21347018      PMCID: PMC3041457     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  10 in total

1.  A method for the automated mapping of laboratory results to LOINC.

Authors:  L M Lau; K Johnson; K Monson; S H Lam; S M Huff
Journal:  Proc AMIA Symp       Date:  2000

2.  Automated mapping of observation codes using extensional definitions.

Authors:  K A Zollo; S M Huff
Journal:  J Am Med Inform Assoc       Date:  2000 Nov-Dec       Impact factor: 4.497

3.  Evaluation of the UMLS as a terminology and knowledge resource for biomedical informatics.

Authors:  Olivier Bodenreider; Joyce A Mitchell; Alexa T McCray
Journal:  Proc AMIA Symp       Date:  2002

4.  LOINC, a universal standard for identifying laboratory observations: a 5-year update.

Authors:  Clement J McDonald; Stanley M Huff; Jeffrey G Suico; Gilbert Hill; Dennis Leavelle; Raymond Aller; Arden Forrey; Kathy Mercer; Georges DeMoor; John Hook; Warren Williams; James Case; Pat Maloney
Journal:  Clin Chem       Date:  2003-04       Impact factor: 8.327

Review 5.  Desiderata for controlled medical vocabularies in the twenty-first century.

Authors:  J J Cimino
Journal:  Methods Inf Med       Date:  1998-11       Impact factor: 2.176

6.  Development of the Logical Observation Identifier Names and Codes (LOINC) vocabulary.

Authors:  S M Huff; R A Rocha; C J McDonald; G J De Moor; T Fiers; W D Bidgood; A W Forrey; W G Francis; W R Tracy; D Leavelle; F Stalling; B Griffin; P Maloney; D Leland; L Charles; K Hutchins; J Baenziger
Journal:  J Am Med Inform Assoc       Date:  1998 May-Jun       Impact factor: 4.497

7.  Logical observation identifier names and codes (LOINC) database: a public use set of codes and names for electronic reporting of clinical laboratory test results.

Authors:  A W Forrey; C J McDonald; G DeMoor; S M Huff; D Leavelle; D Leland; T Fiers; L Charles; B Griffin; F Stalling; A Tullis; K Hutchins; J Baenziger
Journal:  Clin Chem       Date:  1996-01       Impact factor: 8.327

8.  Indexing consistency in MEDLINE.

Authors:  M E Funk; C A Reid
Journal:  Bull Med Libr Assoc       Date:  1983-04

9.  The Indiana network for patient care: a working local health information infrastructure. An example of a working infrastructure collaboration that links data from five health systems and hundreds of millions of entries.

Authors:  Clement J McDonald; J Marc Overhage; Michael Barnes; Gunther Schadow; Lonnie Blevins; Paul R Dexter; Burke Mamlin
Journal:  Health Aff (Millwood)       Date:  2005 Sep-Oct       Impact factor: 6.301

10.  Combining laboratory data sets from multiple institutions using the logical observation identifier names and codes (LOINC).

Authors:  D M Baorto; J J Cimino; C A Parvin; M G Kahn
Journal:  Int J Med Inform       Date:  1998-07       Impact factor: 4.046

  10 in total
  10 in total

1.  Investigating the semantic interoperability of laboratory data exchanged using LOINC codes in three large institutions.

Authors:  Ming-Chin Lin; Daniel J Vreeman; Stanley M Huff
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  Auditing consistency and usefulness of LOINC use among three large institutions - using version spaces for grouping LOINC codes.

Authors:  M C Lin; D J Vreeman; Clement J McDonald; S M Huff
Journal:  J Biomed Inform       Date:  2012-01-28       Impact factor: 6.317

3.  Learning from the crowd while mapping to LOINC.

Authors:  Daniel J Vreeman; John Hook; Brian E Dixon
Journal:  J Am Med Inform Assoc       Date:  2015-07-29       Impact factor: 4.497

4.  Impact of selective mapping strategies on automated laboratory result notification to public health authorities.

Authors:  Roland E Gamache; Brian E Dixon; Shaun Grannis; Daniel J Vreeman
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

5.  Mapping local laboratory interface terms to LOINC at a German university hospital using RELMA V.5: a semi-automated approach.

Authors:  Christian Zunner; Thomas Bürkle; Hans-Ulrich Prokosch; Thomas Ganslandt
Journal:  J Am Med Inform Assoc       Date:  2012-07-16       Impact factor: 4.497

6.  A corpus-based approach for automated LOINC mapping.

Authors:  Mustafa Fidahussein; Daniel J Vreeman
Journal:  J Am Med Inform Assoc       Date:  2013-05-15       Impact factor: 4.497

7.  Evaluating congruence between laboratory LOINC value sets for quality measures, public health reporting, and mapping common tests.

Authors:  Jianmin Wu; John T Finnell; Daniel J Vreeman
Journal:  AMIA Annu Symp Proc       Date:  2013-11-16

8.  An approach to improve LOINC mapping through augmentation of local test names.

Authors:  Hyeoneui Kim; Robert El-Kareh; Anupam Goel; F N U Vineet; Wendy W Chapman
Journal:  J Biomed Inform       Date:  2011-12-21       Impact factor: 6.317

9.  Automated Mapping of Real-world Oncology Laboratory Data to LOINC.

Authors:  Jonathan Kelly; Chen Wang; Jianyi Zhang; Spandan Das; Anna Ren; Pradnya Warnekar
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

10.  The potential adoption benefits and challenges of LOINC codes in a laboratory department: a case study.

Authors:  Chukwuemeka Uchegbu; Xia Jing
Journal:  Health Inf Sci Syst       Date:  2017-10-11
  10 in total

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