Literature DB >> 22195092

Interoperability of medical databases: construction of mapping between hospitals laboratory results assisted by automated comparison of their distributions.

Grégoire Ficheur1, Emmanuel Chazard, Aurélien Schaffar, Matthieu Genty, Régis Beuscart.   

Abstract

In hospital information systems, laboratory results are stored using specific terminologies which may differ between hospitals. The objective is to create a tool helping to build a mapping between a target terminology (reference dataset) and a new one. Using a training sample consisting of correct and incorrect correspondences between parameters of different hospitals, a match probability score is built. This model also enables to determine the theoretical conversion factor between two parameters. This method is evaluated on a test sample of a new hospital: For each reference parameter, best candidates are returned and sorted in decreasing order using the probability given by the model. The correct correspondent of 14 among 15 reference parameters are ranked in the top five among more than 70. All conversion factors are correct. A mapping webtool is built to present the essential information for best candidates. Using this tool, an expert has found all the correct pairs.

Mesh:

Year:  2011        PMID: 22195092      PMCID: PMC3243167     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  11 in total

1.  Automated mapping of observation codes using extensional definitions.

Authors:  K A Zollo; S M Huff
Journal:  J Am Med Inform Assoc       Date:  2000 Nov-Dec       Impact factor: 4.497

2.  LOINC, a universal standard for identifying laboratory observations: a 5-year update.

Authors:  Clement J McDonald; Stanley M Huff; Jeffrey G Suico; Gilbert Hill; Dennis Leavelle; Raymond Aller; Arden Forrey; Kathy Mercer; Georges DeMoor; John Hook; Warren Williams; James Case; Pat Maloney
Journal:  Clin Chem       Date:  2003-04       Impact factor: 8.327

3.  A characterization of local LOINC mapping for laboratory tests in three large institutions.

Authors:  M C Lin; D J Vreeman; C J McDonald; S M Huff
Journal:  Methods Inf Med       Date:  2010-08-20       Impact factor: 2.176

4.  Standardizing laboratory data by mapping to LOINC.

Authors:  Agha N Khan; Stanley P Griffith; Catherine Moore; Dorothy Russell; Arnulfo C Rosario; Jeanne Bertolli
Journal:  J Am Med Inform Assoc       Date:  2006-02-24       Impact factor: 4.497

5.  Mapping Department of Defense laboratory results to Logical Observation Identifiers Names and Codes (LOINC).

Authors:  Lee Min Lau; Pam D Banning; Kent Monson; Elva Knight; Pat S Wilson; Shaun C Shakib
Journal:  AMIA Annu Symp Proc       Date:  2005

6.  A comparison of Intelligent Mapper and document similarity scores for mapping local radiology terms to LOINC.

Authors:  Daniel J Vreeman; Clement J McDonald
Journal:  AMIA Annu Symp Proc       Date:  2006

7.  Data-mining-based detection of adverse drug events.

Authors:  Emmanuel Chazard; Cristian Preda; Béatrice Merlin; Grégoire Ficheur; Régis Beuscart
Journal:  Stud Health Technol Inform       Date:  2009

8.  A Knowledge Intensive Approach to Mapping Clinical Narrative to LOINC.

Authors:  Marcelo Fiszman; Dongwook Shin; Charles A Sneiderman; Honglan Jin; Thomas C Rindflesch
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

9.  Logical observation identifier names and codes (LOINC) database: a public use set of codes and names for electronic reporting of clinical laboratory test results.

Authors:  A W Forrey; C J McDonald; G DeMoor; S M Huff; D Leavelle; D Leland; T Fiers; L Charles; B Griffin; F Stalling; A Tullis; K Hutchins; J Baenziger
Journal:  Clin Chem       Date:  1996-01       Impact factor: 8.327

10.  Standardization of terminology in laboratory medicine II.

Authors:  Kap No Lee; Jong-Hyun Yoon; Won Ki Min; Hwan Sub Lim; Junghan Song; Seok Lae Chae; Seongsoo Jang; Chang-Seok Ki; Sook Young Bae; Jang Su Kim; Jung-Ah Kwon; Chang Kyu Lee; Soo-Young Yoon
Journal:  J Korean Med Sci       Date:  2008-08       Impact factor: 2.153

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  2 in total

1.  Adverse drug events with hyperkalaemia during inpatient stays: evaluation of an automated method for retrospective detection in hospital databases.

Authors:  Grégoire Ficheur; Emmanuel Chazard; Jean-Baptiste Beuscart; Béatrice Merlin; Michel Luyckx; Régis Beuscart
Journal:  BMC Med Inform Decis Mak       Date:  2014-09-12       Impact factor: 2.796

2.  Harmonizing units and values of quantitative data elements in a very large nationally pooled electronic health record (EHR) dataset.

Authors:  Katie R Bradwell; Jacob T Wooldridge; Benjamin Amor; Tellen D Bennett; Adit Anand; Carolyn Bremer; Yun Jae Yoo; Zhenglong Qian; Steven G Johnson; Emily R Pfaff; Andrew T Girvin; Amin Manna; Emily A Niehaus; Stephanie S Hong; Xiaohan Tanner Zhang; Richard L Zhu; Mark Bissell; Nabeel Qureshi; Joel Saltz; Melissa A Haendel; Christopher G Chute; Harold P Lehmann; Richard A Moffitt
Journal:  J Am Med Inform Assoc       Date:  2022-06-14       Impact factor: 7.942

  2 in total

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