Literature DB >> 11052662

Alignment of lysine-anchored membrane peptides under conditions of hydrophobic mismatch: a CD, 15N and 31P solid-state NMR spectroscopy investigation.

U Harzer1, B Bechinger.   

Abstract

The secondary structure and alignment of hydrophobic model peptides in phosphatidylcholine membranes were investigated as a function of hydrophobic mismatch by CD and oriented proton-decoupled (15)N solid-state NMR spectroscopies. In addition, the macroscopic phase and the orientational order of the phospholipid headgroups was analyzed by proton-decoupled (31)P NMR spectroscopy. Both, variations in the composition of the polypeptide (10-30 hydrophobic residues) as well as the fatty acid acyl chain of the phospholipid (10-22 carbons) were studied. At lipid-to-peptide ratios of 50, the peptides adopt helical conformations and bilayer macroscopic phases are predominant. The peptide and lipid maintain much of their orientational order even when the peptide is calculated to be 3 A too short or 14 A too long to fit into the pure lipid bilayer. A continuous decrease in the (15)N chemical shift obtained from transmembrane peptides in oriented membranes suggests an increasing helical tilt angle when the membrane thickness is reduced. This response is, however, insufficient to account for the full hydrophobic mismatch. When the helix is much too long to span the membrane, both the lipid and the peptide order are perturbed, an indication of changes in the macroscopic properties of the membrane. In contrast, sequences that are much too short show little effect on the phospholipid headgroup order, but the peptides exhibit a wide range of orientational distributions predominantly close to parallel to the membrane surface. A thermodynamic formalism is applied to describe the two-state equilibrium between in-plane and transmembrane peptide orientations.

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Year:  2000        PMID: 11052662     DOI: 10.1021/bi000770n

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  41 in total

1.  Organization of model helical peptides in lipid bilayers: insight into the behavior of single-span protein transmembrane domains.

Authors:  Simon Sharpe; Kathryn R Barber; Chris W M Grant; David Goodyear; Michael R Morrow
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

Review 2.  Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.

Authors:  Hazime Saitô; Isao Ando; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05-07       Impact factor: 9.795

3.  Redesigning channel-forming peptides: amino acid substitutions that enhance rates of supramolecular self-assembly and raise ion transport activity.

Authors:  Lalida P Shank; James R Broughman; Wade Takeguchi; Gabriel Cook; Ashley S Robbins; Lindsey Hahn; Gary Radke; Takeo Iwamoto; Bruce D Schultz; John M Tomich
Journal:  Biophys J       Date:  2005-12-30       Impact factor: 4.033

4.  Structure, topology, and tilt of cell-signaling peptides containing nuclear localization sequences in membrane bilayers determined by solid-state NMR and molecular dynamics simulation studies.

Authors:  Ayyalusamy Ramamoorthy; Senthil K Kandasamy; Dong-Kuk Lee; Srikanth Kidambi; Ronald G Larson
Journal:  Biochemistry       Date:  2007-01-30       Impact factor: 3.162

5.  Solid-state NMR studies of a diverged microsomal amino-proximate delta12 desaturase peptide reveal causes of stability in bilayer: tyrosine anchoring and arginine snorkeling.

Authors:  William J Gibbons; Ethan S Karp; Nick A Cellar; Robert E Minto; Gary A Lorigan
Journal:  Biophys J       Date:  2005-12-02       Impact factor: 4.033

6.  Characterization of the structure and membrane interaction of the antimicrobial peptides aurein 2.2 and 2.3 from Australian southern bell frogs.

Authors:  Yeang-Ling Pan; John T-J Cheng; John Hale; Jinhe Pan; Robert E W Hancock; Suzana K Straus
Journal:  Biophys J       Date:  2007-01-26       Impact factor: 4.033

7.  The control of transmembrane helix transverse position in membranes by hydrophilic residues.

Authors:  Shyam S Krishnakumar; Erwin London
Journal:  J Mol Biol       Date:  2007-10-17       Impact factor: 5.469

8.  Molecular dynamics simulation of transmembrane polypeptide orientational fluctuations.

Authors:  David J Goodyear; Simon Sharpe; Chris W M Grant; Michael R Morrow
Journal:  Biophys J       Date:  2004-10-15       Impact factor: 4.033

9.  Membrane composition determines pardaxin's mechanism of lipid bilayer disruption.

Authors:  Kevin J Hallock; Dong-Kuk Lee; John Omnaas; Henry I Mosberg; A Ramamoorthy
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

10.  Geometry and intrinsic tilt of a tryptophan-anchored transmembrane alpha-helix determined by (2)H NMR.

Authors:  Patrick C A van der Wel; Erik Strandberg; J Antoinette Killian; Roger E Koeppe
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

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