Literature DB >> 11025531

Expression profiling of single mammalian cells--small is beautiful.

G Brady1.   

Abstract

Increasingly mRNA expression patterns established using a variety of molecular technologies such as cDNA microarrays, SAGE and cDNA display are being used to identify potential regulatory genes and as a means of providing valuable insights into the biological status of the starting sample. Until recently, the application of these techniques has been limited to mRNA isolated from millions or, at very best, several thousand cells thereby restricting the study of small samples and complex tissues. To overcome this limitation a variety of amplification approaches have been developed which are capable of broadly evaluating mRNA expression patterns in single cells. This review will describe approaches that have been employed to examine global gene expression patterns either in small numbers of cells or, wherever possible, in actual isolated single cells. The first half of the review will summarize the technical aspects of methods developed for single-cell analysis and the latter half of the review will describe the areas of biological research that have benefited from single-cell expression analysis. Copyright 2000 John Wiley & Sons, Ltd.

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Year:  2000        PMID: 11025531      PMCID: PMC2448376          DOI: 10.1002/1097-0061(20000930)17:3<211::AID-YEA26>3.0.CO;2-7

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  2 in total

1.  Analysis of gene expression in subpopulations of murine hematopoietic stem and progenitor cells.

Authors:  M V Zinovyeva; J M Zijlmans; W E Fibbe; J W Visser; A V Belyavsky
Journal:  Exp Hematol       Date:  2000-03       Impact factor: 3.084

2.  Impaired granulocytic differentiation in vitro in hematopoietic cells lacking retinoic acid receptors alpha1 and gamma.

Authors:  J Labrecque; D Allan; P Chambon; N N Iscove; D Lohnes; T Hoang
Journal:  Blood       Date:  1998-07-15       Impact factor: 22.113

  2 in total
  11 in total

Review 1.  Challenges in the study of neuronal differentiation: a view from the embryonic eye.

Authors:  Ruben Adler
Journal:  Dev Dyn       Date:  2005-11       Impact factor: 3.780

2.  Simultaneous maximization of cell permeabilization and viability in single-cell electroporation using an electrolyte-filled capillary.

Authors:  Aparna Agarwal; Imants Zudans; Owe Orwar; Stephen G Weber
Journal:  Anal Chem       Date:  2007-01-01       Impact factor: 6.986

Review 3.  Single cell transcriptomics of hypothalamic warm sensitive neurons that control core body temperature and fever response Signaling asymmetry and an extension of chemical neuroanatomy.

Authors:  James Eberwine; Tamas Bartfai
Journal:  Pharmacol Ther       Date:  2010-10-21       Impact factor: 12.310

4.  A microfluidic processor for gene expression profiling of single human embryonic stem cells.

Authors:  Jiang F Zhong; Yan Chen; Joshua S Marcus; Axel Scherer; Stephen R Quake; Clive R Taylor; Leslie P Weiner
Journal:  Lab Chip       Date:  2007-11-02       Impact factor: 6.799

5.  Gene expression profiling of the developing mouse kidney and embryo.

Authors:  Lisa Shaw; Penny A Johnson; Susan J Kimber
Journal:  In Vitro Cell Dev Biol Anim       Date:  2009-12-09       Impact factor: 2.416

Review 6.  Gene expression profiling of seizure disorders.

Authors:  Robert C Elliott; Daniel H Lowenstein
Journal:  Neurochem Res       Date:  2004-06       Impact factor: 3.996

7.  Imaging approach for monitoring cellular metabolites and ions using genetically encoded biosensors.

Authors:  Sakiko Okumoto
Journal:  Curr Opin Biotechnol       Date:  2010-02-16       Impact factor: 9.740

Review 8.  Progress in the application of DNA microarrays.

Authors:  E K Lobenhofer; P R Bushel; C A Afshari; H K Hamadeh
Journal:  Environ Health Perspect       Date:  2001-09       Impact factor: 9.031

9.  Global gene expression profiling of individual human oocytes and embryos demonstrates heterogeneity in early development.

Authors:  Lisa Shaw; Sharon F Sneddon; Leo Zeef; Susan J Kimber; Daniel R Brison
Journal:  PLoS One       Date:  2013-05-22       Impact factor: 3.240

10.  Gene expression analysis on small numbers of invasive cells collected by chemotaxis from primary mammary tumors of the mouse.

Authors:  Weigang Wang; Jeffrey B Wyckoff; Yarong Wang; Erwin P Bottinger; Jeffrey E Segall; John S Condeelis
Journal:  BMC Biotechnol       Date:  2003-08-12       Impact factor: 2.563

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