Literature DB >> 10959633

Measurement of the protein backbone dihedral angle phi based on quantification of remote CSA/DD interference in inter-residue 13C'(i - 1)-13Calpha(i) multiple-quantum coherences.

K Kloiber1, R Konrat.   

Abstract

A novel triple-resonance NMR method is presented for the measurement of the protein backbone dihedral angle phi based on differential multiple-quantum relaxation induced by relaxation interference between 1Halpha(i)-13Calpha(i) dipolar and 13C'(i - 1) (carbonyl) chemical shift anisotropy mechanisms. The method employs a simultaneous transfer of 15N magnetization to the inter- and intra-residue 13Calpha carbons as well as the directly attached carbonyl carbon 13C'. Results obtained on 13C,15N-labeled ubiquitin demonstrate the potential of the method.

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Year:  2000        PMID: 10959633     DOI: 10.1023/a:1008393903160

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  5 in total

1.  Direct measurement of angles between bond vectors in high-resolution NMR.

Authors:  B Reif; M Hennig; C Griesinger
Journal:  Science       Date:  1997-05-23       Impact factor: 47.728

2.  Structure of ubiquitin refined at 1.8 A resolution.

Authors:  S Vijay-Kumar; C E Bugg; W J Cook
Journal:  J Mol Biol       Date:  1987-04-05       Impact factor: 5.469

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Authors:  E Kupce; J Boyd; I D Campbell
Journal:  J Magn Reson B       Date:  1995-03

4.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
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5.  Internal dynamics of human ubiquitin revealed by 13C-relaxation studies of randomly fractionally labeled protein.

Authors:  A J Wand; J L Urbauer; R P McEvoy; R J Bieber
Journal:  Biochemistry       Date:  1996-05-14       Impact factor: 3.162

  5 in total
  13 in total

1.  Geometry dependent two-dimensional heteronuclear multiplet effects in paramagnetic proteins.

Authors:  P K Madhu; R Grandori; K Hohenthanner; P K Mandal; N Müller
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

2.  Intraresidue 1H-15N-13C' and 1H alpha-13C alpha-13C' dipole-CSA relaxation interference as a source of constraints for structural refinement of metal-binding sites in zinc-finger proteins.

Authors:  K Kloiber; W Schüler; R Konrat
Journal:  J Biomol NMR       Date:  2001-04       Impact factor: 2.835

3.  Correlated motions of successive amide N-H bonds in proteins.

Authors:  Philippe Pelupessy; Sapna Ravindranathan; Geoffrey Bodenhausen
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

4.  Precise structural determination of weakly binding peptides by utilizing dihedral angle constraints.

Authors:  Yumiko Mizukoshi; Michiko Nagasu; Ichio Shimada; Hideo Takahashi
Journal:  J Biomol NMR       Date:  2010-03-14       Impact factor: 2.835

5.  Automated NMR determination of protein backbone dihedral angles from cross-correlated spin relaxation.

Authors:  Karin Kloiber; Wolfgang Schüler; Robert Konrat
Journal:  J Biomol NMR       Date:  2002-04       Impact factor: 2.835

6.  Exposing the Moving Parts of Proteins with NMR Spectroscopy.

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Journal:  J Phys Chem Lett       Date:  2012-04-02       Impact factor: 6.475

7.  Pairwise NMR experiments for the determination of protein backbone dihedral angle Phi based on cross-correlated spin relaxation.

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Journal:  J Biomol NMR       Date:  2007-01-20       Impact factor: 2.835

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Authors:  Rieko Ishima; Nese Kurt Yilmaz; Celia A Schiffer
Journal:  J Biomol NMR       Date:  2019-06-26       Impact factor: 2.835

9.  Correlated dynamics between protein HN and HC bonds observed by NMR cross relaxation.

Authors:  Beat Vögeli; Lishan Yao
Journal:  J Am Chem Soc       Date:  2009-03-18       Impact factor: 15.419

10.  TROSY experiment for refinement of backbone psi and phi by simultaneous measurements of cross-correlated relaxation rates and 3,4J(H alpha HN) coupling constants.

Authors:  Beat Vögeli; Konstantin Pervushin
Journal:  J Biomol NMR       Date:  2002-12       Impact factor: 2.835

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