Literature DB >> 10958625

Guilt by association: contextual information in genome analysis.

L Aravind1.   

Abstract

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Year:  2000        PMID： 10958625     DOI： 10.1101/gr.10.8.1074

Source DB:  PubMed          Journal:  Genome Res        ISSN： 1088-9051            Impact factor:   9.043


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  74 in total

1.  A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis.

Authors:  Kira S Makarova; L Aravind; Nick V Grishin; Igor B Rogozin; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

Review 2.  Network genomics--a novel approach for the analysis of biological systems in the post-genomic era.

Authors:  Christian V Forst
Journal:  Mol Biol Rep       Date:  2002-09       Impact factor: 2.316

3.  SVM-Prot: Web-based support vector machine software for functional classification of a protein from its primary sequence.

Authors:  C Z Cai; L Y Han; Z L Ji; X Chen; Y Z Chen
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

4.  An analysis of the validity and utility of the proximon proposition.

Authors:  Gregory Vey; Trevor C Charles
Journal:  Funct Integr Genomics       Date:  2016-02-02       Impact factor: 3.410

5.  From single genes to co-expression networks: extracting knowledge from barley functional genomics.

Authors:  P Faccioli; P Provero; C Herrmann; A M Stanca; C Morcia; V Terzi
Journal:  Plant Mol Biol       Date:  2005-07       Impact factor: 4.076

Review 6.  Practical and theoretical advances in predicting the function of a protein by its phylogenetic distribution.

Authors:  Philip R Kensche; Vera van Noort; Bas E Dutilh; Martijn A Huynen
Journal:  J R Soc Interface       Date:  2008-02-06       Impact factor: 4.118

Review 7.  Archaeology of eukaryotic DNA replication.

Authors:  Kira S Makarova; Eugene V Koonin
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-11-01       Impact factor: 10.005

8.  Evolutionary and functional classification of the CARF domain superfamily, key sensors in prokaryotic antivirus defense.

Authors:  Kira S Makarova; Albertas Timinskas; Yuri I Wolf; Ayal B Gussow; Virginijus Siksnys; Česlovas Venclovas; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2020-09-18       Impact factor: 16.971

Review 9.  'Unknown' proteins and 'orphan' enzymes: the missing half of the engineering parts list--and how to find it.

Authors:  Andrew D Hanson; Anne Pribat; Jeffrey C Waller; Valérie de Crécy-Lagard
Journal:  Biochem J       Date:  2009-12-14       Impact factor: 3.857

10.  Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements.

Authors:  Kira S Makarova; Yuri I Wolf; John van der Oost; Eugene V Koonin
Journal:  Biol Direct       Date:  2009-08-25       Impact factor: 4.540
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