Literature DB >> 1092682

Biosynthesis of 7, 8-diaminopelargonic acid from 7-keto-8-aminopelargonic acid and S-adenosyl-L-methionine. The kinetics of the reaction.

G L Stoner, M A Eisenberg.   

Abstract

The transamination of 7-keto-8-aminopelargonic acid by 7, 8-diaminopelargonic acid aminotransferase of Escherichia coli requires S-adenosyl-L-methionine as the amino donor. Initial velocity studies of this reaction revealed a parallel pattern of reciprocal plots characteristic of a ping-pong mechanism. m-Keto-8-aminopelargonic acid showed strong substrate inhibition which was competitive with S-adenosyl-L-methionine. The Michaelis constants determined for S-adenosyl-L-methionine and 7-keto-8-aminopelargonic acid were 0.20 mM and 1.2 muM, respectively. The Vmax of 0.16 mumol/mg/min corresponds to a turnover number for the enzyme of only 17 molecules/molecule enzyme/min. The Km values for the interaction of pyridoxal 5'-phosphate and pyridoxamine 5'-phosphate with the apoenzyme were determined to be 32 muM and 21 muM, respectively. Two classes of inhibitors were observed: (a) those which showed competitive inhibition with respect to S-adenosynd (b) those which showed noncompetitive inhibition with respect to both substrates. In the former group were S-adenosyl-L-(2-hydroxy-4-methylthio)butyric acid and adenosine. In the latter were S-adenosyl-L-ethionine, adenine, and 8-keto-7-aminopelargonic acid. L-Methionine, S-methyl-L-methionine, inosine, and hypoxanthine were not significantly inhibitory. Certain conformations of the substrates in the active site of the enzyme have been proposed which explain: (a) the requirement for the sulfonium ion of S-adenosyl-L-methionine for activity but not for binding to the enzyme, and (b) the ability of 7-keto-8-aminopelargonic acid to bind to the pyridoxal form of the enzyme as a potent substrate inhibitor.

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Year:  1975        PMID: 1092682

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  13 in total

1.  A continuous fluorescence displacement assay for BioA: an enzyme involved in biotin biosynthesis.

Authors:  Daniel J Wilson; Ce Shi; Benjamin P Duckworth; Joseph M Muretta; Ujjini Manjunatha; Yuk Y Sham; David D Thomas; Courtney C Aldrich
Journal:  Anal Biochem       Date:  2011-05-08       Impact factor: 3.365

2.  Structure-Based Optimization of Pyridoxal 5'-Phosphate-Dependent Transaminase Enzyme (BioA) Inhibitors that Target Biotin Biosynthesis in Mycobacterium tuberculosis.

Authors:  Feng Liu; Surendra Dawadi; Kimberly M Maize; Ran Dai; Sae Woong Park; Dirk Schnappinger; Barry C Finzel; Courtney C Aldrich
Journal:  J Med Chem       Date:  2017-06-22       Impact factor: 7.446

Review 3.  Wybutosine biosynthesis: structural and mechanistic overview.

Authors:  Phanélie Perche-Letuvée; Thibaut Molle; Farhad Forouhar; Etienne Mulliez; Mohamed Atta
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

4.  Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .

Authors:  Sanghamitra Dey; James M Lane; Richard E Lee; Eric J Rubin; James C Sacchettini
Journal:  Biochemistry       Date:  2010-08-10       Impact factor: 3.162

5.  Identification and characterization of a novel biotin biosynthesis gene in Saccharomyces cerevisiae.

Authors:  Hong Wu; Kiyoshi Ito; Hitoshi Shimoi
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

6.  Structure of a critical metabolic enzyme: S-adenosylmethionine synthetase from Cryptosporidium parvum.

Authors:  Jeffrey Ohren; Gwenn G Parungao; Ronald E Viola
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2019-04-02       Impact factor: 1.056

7.  Alternative substrates selective for S-adenosylmethionine synthetases from pathogenic bacteria.

Authors:  Stephen P Zano; Pravin Bhansali; Amarjit Luniwal; Ronald E Viola
Journal:  Arch Biochem Biophys       Date:  2013-05-24       Impact factor: 4.013

8.  Catabolism and lability of S-adenosyl-L-methionine in rat liver extracts.

Authors:  T O Eloranta; E O Kajander
Journal:  Biochem J       Date:  1984-11-15       Impact factor: 3.857

9.  Biotin and Lipoic Acid: Synthesis, Attachment, and Regulation.

Authors:  John E Cronan
Journal:  EcoSal Plus       Date:  2014-05

Review 10.  The specific features of methionine biosynthesis and metabolism in plants.

Authors:  S Ravanel; B Gakière; D Job; R Douce
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-23       Impact factor: 11.205

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