Literature DB >> 21621502

A continuous fluorescence displacement assay for BioA: an enzyme involved in biotin biosynthesis.

Daniel J Wilson1, Ce Shi, Benjamin P Duckworth, Joseph M Muretta, Ujjini Manjunatha, Yuk Y Sham, David D Thomas, Courtney C Aldrich.   

Abstract

Cofactor biosynthetic pathways represent a rich source of potential antibiotic targets. The second step in biotin biosynthesis is performed by BioA, a pyridoxal 5'-phosphate (PLP)-dependent enzyme. This enzyme has been confirmed as a candidate target in Mycobacterium tuberculosis; however, the current bioassay used to measure BioA activity is cumbersome and low throughput. Here we describe the design, development, and optimization of a continuous coupled fluorescence displacement assay to measure BioA activity. In this coupled assay, BioD converts the product of the BioA-catalyzed reaction into dethiobiotin, which is subsequently detected by displacement of a fluorescently labeled dethiobiotin probe from streptavidin. The assay was further adapted to a high-throughput screening format and validated against the LOPAC(1280) library.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21621502      PMCID: PMC3135573          DOI: 10.1016/j.ab.2011.05.003

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  30 in total

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Authors: 
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Authors:  G Kada; H Falk; H J Gruber
Journal:  Biochim Biophys Acta       Date:  1999-03-14

3.  Active site mutants of Escherichia coli dethiobiotin synthetase: effects of mutations on enzyme catalytic and structural properties.

Authors:  G Yang; T Sandalova; K Lohman; Y Lindqvist; A R Rendina
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4.  Biosynthesis of 7,8-diaminopelargonic acid, a biotin intermediate, from 7-keto-8-aminopelargonic acid and S-adenosyl-L-methionine.

Authors:  M A Eisenberg; G L Stoner
Journal:  J Bacteriol       Date:  1971-12       Impact factor: 3.490

5.  Biotin synthesis begins by hijacking the fatty acid synthetic pathway.

Authors:  Steven Lin; Ryan E Hanson; John E Cronan
Journal:  Nat Chem Biol       Date:  2010-08-08       Impact factor: 15.040

6.  From genetic footprinting to antimicrobial drug targets: examples in cofactor biosynthetic pathways.

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Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

7.  Genetic requirements for mycobacterial survival during infection.

Authors:  Christopher M Sassetti; Eric J Rubin
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9.  Dethiobiotin synthetase: the carbonylation of 7,8-diaminonanoic acid proceeds regiospecifically via the N7-carbamate.

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Journal:  Nature       Date:  1998-06-11       Impact factor: 49.962

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  12 in total

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Authors:  Ce Shi; Courtney C Aldrich
Journal:  J Org Chem       Date:  2012-07-03       Impact factor: 4.354

2.  Structure-Based Optimization of Pyridoxal 5'-Phosphate-Dependent Transaminase Enzyme (BioA) Inhibitors that Target Biotin Biosynthesis in Mycobacterium tuberculosis.

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5.  Target-based identification of whole-cell active inhibitors of biotin biosynthesis in Mycobacterium tuberculosis.

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6.  Fragment-based exploration of binding site flexibility in Mycobacterium tuberculosis BioA.

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10.  Evaluating the sensitivity of Mycobacterium tuberculosis to biotin deprivation using regulated gene expression.

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