Literature DB >> 10872458

Mutagenesis of glycosidases.

H D Ly1, S G Withers.   

Abstract

Enzymatic hydrolysis of glycosides can occur by one of two elementary mechanisms identified by the stereochemical outcome of the reaction, inversion or retention. The key active-site residues involved are a pair of carboxylic acids in each case, and strategies for their identification and for probing the details of their roles in catalysis have been developed through detailed kinetic analysis of mutants. Similarly the roles of other active-site residues have also been probed this way, and mutants have been developed that trap intermediates in catalysis, allowing the determination of the three-dimensional structures of several such key species. By manipulating the locations or even the presence of these carboxyl side chains in the active site, the mechanisms of several glycosidases have been completely changed, and this has allowed the development of "glycosynthases," mutant glycosidases that are capable of synthesizing oligosaccharides but unable to degrade them. Surprisingly little progress has been made on altering specificities through mutagenesis, although recent results suggest that gene shuffling coupled with effective screens will provide the most effective approach.

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Year:  1999        PMID: 10872458     DOI: 10.1146/annurev.biochem.68.1.487

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  37 in total

1.  Paenibacillus sp. TS12 glucosylceramidase: kinetic studies of a novel sub-family of family 3 glycosidases and identification of the catalytic residues.

Authors:  Krisztina Paal; Makoto Ito; Stephen G Withers
Journal:  Biochem J       Date:  2004-02-15       Impact factor: 3.857

2.  Characterization of the Glu and Asp residues in the active site of human beta-hexosaminidase B.

Authors:  Y Hou; D J Vocadlo; A Leung; S G Withers; D Mahuran
Journal:  Biochemistry       Date:  2001-02-20       Impact factor: 3.162

Review 3.  The alpha-L-fucosidase from Sulfolobus solfataricus.

Authors:  Beatrice Cobucci-Ponzano; Fiorella Conte; Mosè Rossi; Marco Moracci
Journal:  Extremophiles       Date:  2007-08-09       Impact factor: 2.395

Review 4.  Endoglycosidases for the Synthesis of Polysaccharides and Glycoconjugates.

Authors:  Chao Li; Lai-Xi Wang
Journal:  Adv Carbohydr Chem Biochem       Date:  2016-08-23       Impact factor: 12.200

5.  Transglycosylation by chitinase D from Serratia proteamaculans improved through altered substrate interactions.

Authors:  Jogi Madhuprakash; Karunakar Tanneeru; Pallinti Purushotham; Lalitha Guruprasad; Appa Rao Podile
Journal:  J Biol Chem       Date:  2012-10-31       Impact factor: 5.157

6.  A sensitive gel-based method combining distinct cyclophellitol-based probes for the identification of acid/base residues in human retaining β-glucosidases.

Authors:  Wouter W Kallemeijn; Martin D Witte; Tineke M Voorn-Brouwer; Marthe T C Walvoort; Kah-Yee Li; Jeroen D C Codée; Gijsbert A van der Marel; Rolf G Boot; Herman S Overkleeft; Johannes M F G Aerts
Journal:  J Biol Chem       Date:  2014-10-24       Impact factor: 5.157

Review 7.  Chemoenzymatic Methods for the Synthesis of Glycoproteins.

Authors:  Chao Li; Lai-Xi Wang
Journal:  Chem Rev       Date:  2018-08-24       Impact factor: 60.622

8.  Cel9D, an atypical 1,4-beta-D-glucan glucohydrolase from Fibrobacter succinogenes: characteristics, catalytic residues, and synergistic interactions with other cellulases.

Authors:  Meng Qi; Hyun-Sik Jun; Cecil W Forsberg
Journal:  J Bacteriol       Date:  2008-01-18       Impact factor: 3.490

9.  The structure of a Streptomyces avermitilis α-L-rhamnosidase reveals a novel carbohydrate-binding module CBM67 within the six-domain arrangement.

Authors:  Zui Fujimoto; Adam Jackson; Mari Michikawa; Tomoko Maehara; Mitsuru Momma; Bernard Henrissat; Harry J Gilbert; Satoshi Kaneko
Journal:  J Biol Chem       Date:  2013-03-13       Impact factor: 5.157

10.  Truncations and functional carboxylic acid residues of yeast processing alpha-glucosidase I.

Authors:  Amirreza Faridmoayer; Christine H Scaman
Journal:  Glycoconj J       Date:  2007-04-26       Impact factor: 2.916

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