Literature DB >> 10871616

The binding of substrate analogs to phosphotriesterase.

M M Benning1, S B Hong, F M Raushel, H M Holden.   

Abstract

Phosphotriesterase (PTE) from Pseudomonas diminuta catalyzes the detoxification of organophosphates such as the widely utilized insecticide paraoxon and the chemical warfare agent sarin. The three-dimensional structure of the enzyme is known from high resolution x-ray crystallographic analyses. Each subunit of the homodimer folds into a so-called TIM barrel, with eight strands of parallel beta-sheet. The two zinc ions required for activity are positioned at the C-terminal portion of the beta-barrel. Here, we describe the three-dimensional structure of PTE complexed with the inhibitor diisopropyl methyl phosphonate, which serves as a mimic for sarin. Additionally, the structure of the enzyme complexed with triethyl phosphate is also presented. In the case of the PTE-diisopropyl methyl phosphonate complex, the phosphoryl oxygen of the inhibitor coordinates to the more solvent-exposed zinc ion (2.5 A), thereby lending support to the presumed catalytic mechanism involving metal coordination of the substrate. In the PTE-triethyl phosphate complex, the phosphoryl oxygen of the inhibitor is positioned at 3.4 A from the more solvent-exposed zinc ion. The two structures described in this report provide additional molecular understanding for the ability of this remarkable enzyme to hydrolyze such a wide range of organophosphorus substrates.

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Year:  2000        PMID: 10871616     DOI: 10.1074/jbc.M003852200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  20 in total

1.  Bacterial cell surface display of organophosphorus hydrolase for selective screening of improved hydrolysis of organophosphate nerve agents.

Authors:  Catherine Mee-Hie Cho; Ashok Mulchandani; Wilfred Chen
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

2.  Directed evolution of an extremely fast phosphotriesterase by in vitro compartmentalization.

Authors:  Andrew D Griffiths; Dan S Tawfik
Journal:  EMBO J       Date:  2003-01-02       Impact factor: 11.598

3.  Diminishing returns and tradeoffs constrain the laboratory optimization of an enzyme.

Authors:  Nobuhiko Tokuriki; Colin J Jackson; Livnat Afriat-Jurnou; Kirsten T Wyganowski; Renmei Tang; Dan S Tawfik
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

4.  Multiple Reaction Products from the Hydrolysis of Chiral and Prochiral Organophosphate Substrates by the Phosphotriesterase from Sphingobium sp. TCM1.

Authors:  Andrew N Bigley; Tamari Narindoshvili; Dao Feng Xiang; Frank M Raushel
Journal:  Biochemistry       Date:  2018-03-13       Impact factor: 3.162

5.  Molecular engineering of organophosphate hydrolysis activity from a weak promiscuous lactonase template.

Authors:  Monika M Meier; Chitra Rajendran; Christoph Malisi; Nicholas G Fox; Chengfu Xu; Sandra Schlee; David P Barondeau; Birte Höcker; Reinhard Sterner; Frank M Raushel
Journal:  J Am Chem Soc       Date:  2013-07-29       Impact factor: 15.419

6.  Cloning of a novel aldo-keto reductase gene from Klebsiella sp. strain F51-1-2 and its functional expression in Escherichia coli.

Authors:  Hong Jiang; Chao Yang; Hong Qu; Zheng Liu; Q S Fu; Chuanling Qiao
Journal:  Appl Environ Microbiol       Date:  2007-06-15       Impact factor: 4.792

7.  The role of nonbonded interactions in the conformational dynamics of organophosphorous hydrolase adsorbed onto functionalized mesoporous silica surfaces.

Authors:  Diego E B Gomes; Roberto D Lins; Pedro G Pascutti; Chenghong Lei; Thereza A Soares
Journal:  J Phys Chem B       Date:  2010-01-14       Impact factor: 2.991

8.  Molecular dynamics simulations of the detoxification of paraoxon catalyzed by phosphotriesterase.

Authors:  Xin Zhang; Ruibo Wu; Lingchun Song; Yuchun Lin; Menghai Lin; Zexing Cao; Wei Wu; Yirong Mo
Journal:  J Comput Chem       Date:  2009-11-30       Impact factor: 3.376

9.  Haloalkylphosphorus hydrolases purified from Sphingomonas sp. strain TDK1 and Sphingobium sp. strain TCM1.

Authors:  Katsumasa Abe; Satoshi Yoshida; Yuto Suzuki; Junichi Mori; Yuka Doi; Shouji Takahashi; Yoshio Kera
Journal:  Appl Environ Microbiol       Date:  2014-07-18       Impact factor: 4.792

10.  Cadmium(II) complexes of the glycerophosphodiester-degrading enzyme GpdQ and a biomimetic N,O ligand.

Authors:  Ruth E Mirams; Sarah J Smith; Kieran S Hadler; David L Ollis; Gerhard Schenk; Lawrence R Gahan
Journal:  J Biol Inorg Chem       Date:  2008-06-06       Impact factor: 3.358

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