Literature DB >> 10871388

Modification of human beta-globin locus PAC clones by homologous recombination in Escherichia coli.

A M Imam1, G P Patrinos, M de Krom, S Bottardi, R J Janssens, E Katsantoni, A W Wai, D J Sherratt, F G Grosveld.   

Abstract

We report here modifications of human beta-globin PAC clones by homologous recombination in Escherichia coli DH10B, utilising a plasmid temperature sensitive for replication, the recA gene and a wild-type copy of the rpsL gene which allows for an efficient selection for plasmid loss in this host. High frequencies of recombination are observed even with very small lengths of homology and the method has general utility for introducing insertions, deletions and point mutations. No rearrangements were detected with the exception of one highly repetitive genomic sequence when either the E.COLI: RecA- or the lambdoid phage encoded RecT and RecE-dependent recombination systems were used.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10871388      PMCID: PMC102750          DOI: 10.1093/nar/28.12.e65

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  19 in total

1.  A membrane cofactor protein transgenic mouse model for the study of discordant xenograft rejection.

Authors:  N Yannoutsos; J N Ijzermans; C Harkes; F Bonthuis; C Y Zhou; D White; R L Marquet; F Grosveld
Journal:  Genes Cells       Date:  1996-04       Impact factor: 1.891

2.  Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector.

Authors:  H Shizuya; B Birren; U J Kim; V Mancino; T Slepak; Y Tachiiri; M Simon
Journal:  Proc Natl Acad Sci U S A       Date:  1992-09-15       Impact factor: 11.205

3.  Recombinational construction in Escherichia coli of infectious adenoviral genomes.

Authors:  J Crouzet; L Naudin; C Orsini; E Vigne; L Ferrero; A Le Roux; P Benoit; M Latta; C Torrent; D Branellec; P Denèfle; J F Mayaux; M Perricaudet; P Yeh
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

4.  Restriction of the activity of the recombination site dif to a small zone of the Escherichia coli chromosome.

Authors:  F Cornet; J Louarn; J Patte; J M Louarn
Journal:  Genes Dev       Date:  1996-05-01       Impact factor: 11.361

5.  Direct selection of tetracycline-sensitive Escherichia coli cells using nickel salts.

Authors:  T Podolsky; S T Fong; B T Lee
Journal:  Plasmid       Date:  1996-09       Impact factor: 3.466

6.  Homologous recombination based modification in Escherichia coli and germline transmission in transgenic mice of a bacterial artificial chromosome.

Authors:  X W Yang; P Model; N Heintz
Journal:  Nat Biotechnol       Date:  1997-09       Impact factor: 54.908

7.  A new bacteriophage P1-derived vector for the propagation of large human DNA fragments.

Authors:  P A Ioannou; C T Amemiya; J Garnes; P M Kroisel; H Shizuya; C Chen; M A Batzer; P J de Jong
Journal:  Nat Genet       Date:  1994-01       Impact factor: 38.330

8.  A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1983-07-01       Impact factor: 3.365

9.  Plasmid pSC101 harbors a recombination site, psi, which is able to resolve plasmid multimers and to substitute for the analogous chromosomal Escherichia coli site dif.

Authors:  F Cornet; I Mortier; J Patte; J M Louarn
Journal:  J Bacteriol       Date:  1994-06       Impact factor: 3.490

10.  A new logic for DNA engineering using recombination in Escherichia coli.

Authors:  Y Zhang; F Buchholz; J P Muyrers; A F Stewart
Journal:  Nat Genet       Date:  1998-10       Impact factor: 38.330

View more
  28 in total

1.  Insertion of modifications in the beta-globin locus using GET recombination with single-stranded oligonucleotides and denatured PCR fragments.

Authors:  Duangporn Jamsai; Michael Orford; Suthat Fucharoen; Robert Williamson; Panayiotis A Ioannou
Journal:  Mol Biotechnol       Date:  2003-01       Impact factor: 2.695

2.  Highly efficient modification of bacterial artificial chromosomes (BACs) using novel shuttle vectors containing the R6Kgamma origin of replication.

Authors:  Shiaoching Gong; Xiangdong William Yang; Chenjian Li; Nathaniel Heintz
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

3.  A simple two-step, 'hit and fix' method to generate subtle mutations in BACs using short denatured PCR fragments.

Authors:  Yongping Yang; Shyam K Sharan
Journal:  Nucleic Acids Res       Date:  2003-08-01       Impact factor: 16.971

4.  Multiple interactions between regulatory regions are required to stabilize an active chromatin hub.

Authors:  George P Patrinos; Mariken de Krom; Ernie de Boer; An Langeveld; A M Ali Imam; John Strouboulis; Wouter de Laat; Frank G Grosveld
Journal:  Genes Dev       Date:  2004-06-15       Impact factor: 11.361

5.  A method for generating precise gene deletions and insertions in Escherichia coli.

Authors:  Qi-Ming Zhou; Dong-Jie Fan; Jiang-Bi Xie; Chuan-Peng Liu; Jun-Mei Zhou
Journal:  World J Microbiol Biotechnol       Date:  2010-01-08       Impact factor: 3.312

6.  Mutually exclusive recombination of wild-type and mutant loxP sites in vivo facilitates transposon-mediated deletions from both ends of genomic DNA in PACs.

Authors:  Pradeep K Chatterjee; Leighcraft A Shakes; Deepak K Srivastava; Douglas M Garland; Ken R Harewood; Kyle J Moore; Jonathon S Coren
Journal:  Nucleic Acids Res       Date:  2004-10-19       Impact factor: 16.971

7.  Ikaros and GATA-1 combinatorial effect is required for silencing of human gamma-globin genes.

Authors:  Stefania Bottardi; Julie Ross; Vincent Bourgoin; Nasser Fotouhi-Ardakani; El Bachir Affar; Marie Trudel; Eric Milot
Journal:  Mol Cell Biol       Date:  2008-12-29       Impact factor: 4.272

8.  Age-related vascular pathology in transgenic mice expressing presenilin 1-associated familial Alzheimer's disease mutations.

Authors:  Miguel A Gama Sosa; Rita De Gasperi; Anne B Rocher; Athena Ching-Jung Wang; William G M Janssen; Tony Flores; Gissel M Perez; James Schmeidler; Dara L Dickstein; Patrick R Hof; Gregory A Elder
Journal:  Am J Pathol       Date:  2009-12-11       Impact factor: 4.307

Review 9.  Genomic identification of regulatory elements by evolutionary sequence comparison and functional analysis.

Authors:  Gabriela G Loots
Journal:  Adv Genet       Date:  2008       Impact factor: 1.944

10.  Presenilin-1 regulates induction of hypoxia inducible factor-1α: altered activation by a mutation associated with familial Alzheimer's disease.

Authors:  Rita De Gasperi; Miguel A Gama Sosa; Stella Dracheva; Gregory A Elder
Journal:  Mol Neurodegener       Date:  2010-09-23       Impact factor: 14.195

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.