Literature DB >> 10842741

Dotlet: diagonal plots in a web browser.

T Junier1, M Pagni.   

Abstract

UNLABELLED: Dotlet is a program for comparing sequences by the diagonal plot method. It is designed to be platform-independent and to run in a Web browser, thus enabling the majority of researchers to use it. AVAILABILITY: The applet can be tested at http://www.isrec.isb-sib.ch/java/dotlet/ Dotlet.html, and the source code is available upon request. CONTACT: Thomas. Junier Marco.Pagni @isrec.unil.ch SUPPLEMENTARY: The full documentation about d o t l e t is available from the above URL.

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Year:  2000        PMID： 10842741     DOI： 10.1093/bioinformatics/16.2.178

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  41 in total

1.  trEST, trGEN and Hits: access to databases of predicted protein sequences.

Authors:  M Pagni; C Iseli; T Junier; L Falquet; V Jongeneel; P Bucher
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

2.  Swiss EMBnet node web server.

Authors:  Laurent Falquet; Lorenza Bordoli; Vassilios Ioannidis; Marco Pagni; C Victor Jongeneel
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

3.  MyHits: a new interactive resource for protein annotation and domain identification.

Authors:  Marco Pagni; Vassilios Ioannidis; Lorenzo Cerutti; Monique Zahn-Zabal; C Victor Jongeneel; Laurent Falquet
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

4.  Molecular and cytogenetic characterization of repetitive DNA in the Antarctic polyplacophoran Nuttallochiton mirandus.

Authors:  Maria Assunta Biscotti; Marco Barucca; Teresa Capriglione; Gaetano Odierna; Ettore Olmo; Adriana Canapa
Journal:  Chromosome Res       Date:  2008-08-09       Impact factor: 5.239

5.  Reexamination of Culex pipiens hybridization zone in the Eastern United States by ribosomal DNA-based single nucleotide polymorphism markers.

Authors:  Shaoming Huang; Goudarz Molaei; Theodore G Andreadis
Journal:  Am J Trop Med Hyg       Date:  2011-09       Impact factor: 2.345

6.  DEF6, a novel substrate for the Tec kinase ITK, contains a glutamine-rich aggregation-prone region and forms cytoplasmic granules that co-localize with P-bodies.

Authors:  Fiona Hey; Nathan Czyzewicz; Peter Jones; Fred Sablitzky
Journal:  J Biol Chem       Date:  2012-07-24       Impact factor: 5.157

7.  Evolutionary genomics of miniature inverted-repeat transposable elements (MITEs) in Brassica.

Authors:  Faisal Nouroz; Shumaila Noreen; J S Heslop-Harrison
Journal:  Mol Genet Genomics       Date:  2015-07-01       Impact factor: 3.291

8.  The myofibrillar protein, projectin, is highly conserved across insect evolution except for its PEVK domain.

Authors:  Agnes J Ayme-Southgate; Richard J Southgate; Richard A Philipp; Erik E Sotka; Catherine Kramp
Journal:  J Mol Evol       Date:  2008-12       Impact factor: 2.395

9.  The Foldback-like element Galileo belongs to the P superfamily of DNA transposons and is widespread within the Drosophila genus.

Authors:  Mar Marzo; Marta Puig; Alfredo Ruiz
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-19       Impact factor: 11.205

10.  WebLab: a data-centric, knowledge-sharing bioinformatic platform.

Authors:  Xiaoqiao Liu; Jianmin Wu; Jun Wang; Xiaochuan Liu; Shuqi Zhao; Zhe Li; Lei Kong; Xiaocheng Gu; Jingchu Luo; Ge Gao
Journal:  Nucleic Acids Res       Date:  2009-05-22       Impact factor: 16.971
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