Literature DB >> 10794732

Structure and function of Humicola insolens family 6 cellulases: structure of the endoglucanase, Cel6B, at 1.6 A resolution.

G J Davies1, A M Brzozowski, M Dauter, A Varrot, M Schülein.   

Abstract

Cellulases are traditionally classified as either endoglucanases or cellobiohydrolases on the basis of their respective catalytic activities on crystalline cellulose, which is generally hydrolysed more efficiently only by the cellobiohydrolases. On the basis of the Trichoderma reesei cellobiohydrolase II structure, it was proposed that the active-site tunnel of cellobiohydrolases permitted the processive hydrolysis of cellulose, whereas the corresponding endoglucanases would display open active-site clefts [Rouvinen, Bergfors, Teeri, Knowles and Jones (1990) Science 249, 380-386]. Glycoside hydrolase family 6 contains both cellobiohydrolases and endoglucanases. The structure of the catalytic core of the family 6 endoglucanase Cel6B from Humicola insolens has been solved by molecular replacement with the known T. reesei cellobiohydrolase II as the search model. Strangely, at the sequence level, this enzyme exhibits the highest sequence similarity to family 6 cellobiohydrolases and displays just one of the loop deletions traditionally associated with endoglucanases in this family. However, this enzyme shows no activity on crystalline substrates but a high activity on soluble substrates, which is typical of an endoglucanase. The three-dimensional structure reveals that the deletion of just a single loop of the active site, coupled with the resultant conformational change in a second 'cellobiohydrolase-specific' loop, peels open the active-site tunnel to reveal a substrate-binding groove.

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Year:  2000        PMID: 10794732      PMCID: PMC1221054     

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  28 in total

1.  Improved methods for building protein models in electron density maps and the location of errors in these models.

Authors:  T A Jones; J Y Zou; S W Cowan; M Kjeldgaard
Journal:  Acta Crystallogr A       Date:  1991-03-01       Impact factor: 2.290

2.  Three-dimensional structure of cellobiohydrolase II from Trichoderma reesei.

Authors:  J Rouvinen; T Bergfors; T Teeri; J K Knowles; T A Jones
Journal:  Science       Date:  1990-07-27       Impact factor: 47.728

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  Characterization of a Neocallimastix patriciarum cellulase cDNA (celA) homologous to Trichoderma reesei cellobiohydrolase II.

Authors:  S Denman; G P Xue; B Patel
Journal:  Appl Environ Microbiol       Date:  1996-06       Impact factor: 4.792

5.  Mechanistic studies of active site mutants of Thermomonospora fusca endocellulase E2.

Authors:  D E Wolfgang; D B Wilson
Journal:  Biochemistry       Date:  1999-07-27       Impact factor: 3.162

6.  Structure of the Fusarium oxysporum endoglucanase I with a nonhydrolyzable substrate analogue: substrate distortion gives rise to the preferred axial orientation for the leaving group.

Authors:  G Sulzenbacher; H Driguez; B Henrissat; M Schülein; G J Davies
Journal:  Biochemistry       Date:  1996-12-03       Impact factor: 3.162

7.  The three-dimensional crystal structure of the catalytic core of cellobiohydrolase I from Trichoderma reesei.

Authors:  C Divne; J Ståhlberg; T Reinikainen; L Ruohonen; G Pettersson; J K Knowles; T T Teeri; T A Jones
Journal:  Science       Date:  1994-07-22       Impact factor: 47.728

8.  Hydrolyses of alpha- and beta-cellobiosyl fluorides by cellobiohydrolases of Trichoderma reesei.

Authors:  A K Konstantinidis; I Marsden; M L Sinnott
Journal:  Biochem J       Date:  1993-05-01       Impact factor: 3.857

9.  A novel method for efficient expression cloning of fungal enzyme genes.

Authors:  H Dalbøge; H P Heldt-Hansen
Journal:  Mol Gen Genet       Date:  1994-05-10

10.  Substrate specificity of endoglucanase A from Cellulomonas fimi: fundamental differences between endoglucanases and exoglucanases from family 6.

Authors:  H G Damude; V Ferro; S G Withers; R A Warren
Journal:  Biochem J       Date:  1996-04-15       Impact factor: 3.857

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  18 in total

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Authors:  Gary Kleiger; Ekaterina M Panina; Parag Mallick; David Eisenberg
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2.  Product binding varies dramatically between processive and nonprocessive cellulase enzymes.

Authors:  Lintao Bu; Mark R Nimlos; Michael R Shirts; Jerry Ståhlberg; Michael E Himmel; Michael F Crowley; Gregg T Beckham
Journal:  J Biol Chem       Date:  2012-05-30       Impact factor: 5.157

3.  Protein disorder: conformational distribution of the flexible linker in a chimeric double cellulase.

Authors:  Ingemar von Ossowski; Julian T Eaton; Mirjam Czjzek; Stephen J Perkins; Torben P Frandsen; Martin Schülein; Pierre Panine; Bernard Henrissat; Veronique Receveur-Bréchot
Journal:  Biophys J       Date:  2005-01-14       Impact factor: 4.033

4.  The three-dimensional structure of the cellobiohydrolase Cel7A from Aspergillus fumigatus at 1.5 Å resolution.

Authors:  Olga V Moroz; Michelle Maranta; Tarana Shaghasi; Paul V Harris; Keith S Wilson; Gideon J Davies
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-01-01       Impact factor: 1.056

5.  Crystallization and preliminary crystallographic studies of CbsA, a secretory exoglucanase from Xanthomonas oryzae pv. oryzae.

Authors:  Sushil Kumar; Asfarul S Haque; Gopaljee Jha; Ramesh V Sonti; Rajan Sankaranarayanan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-09-26

6.  The use of Agrobacterium-mediated insertional mutagenesis sequencing to identify novel genes of Humicola insolens involved in cellulase production.

Authors:  Chao Fan; Xinxin Xu; Liya Song; Weishi Guan; Jinyang Li; Bo Liu; Pengjun Shi; Wei Zhang
Journal:  3 Biotech       Date:  2018-02-27       Impact factor: 2.406

7.  Advantages of a distant cellulase catalytic base.

Authors:  Tucker Burgin; Jerry Ståhlberg; Heather B Mayes
Journal:  J Biol Chem       Date:  2018-01-10       Impact factor: 5.157

8.  Multiple functions of aromatic-carbohydrate interactions in a processive cellulase examined with molecular simulation.

Authors:  Christina M Payne; Yannick J Bomble; Courtney B Taylor; Clare McCabe; Michael E Himmel; Michael F Crowley; Gregg T Beckham
Journal:  J Biol Chem       Date:  2011-09-29       Impact factor: 5.157

9.  Ega3 from the fungal pathogen Aspergillus fumigatus is an endo-α-1,4-galactosaminidase that disrupts microbial biofilms.

Authors:  Natalie C Bamford; François Le Mauff; Adithya S Subramanian; Patrick Yip; Claudia Millán; Yongzhen Zhang; Caitlin Zacharias; Adam Forman; Mark Nitz; Jeroen D C Codée; Isabel Usón; Donald C Sheppard; P Lynne Howell
Journal:  J Biol Chem       Date:  2019-08-15       Impact factor: 5.157

10.  Purification and characterization of a new family 45 endoglucanase, STCE1, from Staphylotrichum coccosporum and its overproduction in Humicola insolens.

Authors:  Jinichiro Koga; Yuko Baba; Atsushi Shimonaka; Tomoko Nishimura; Satoshi Hanamura; Toshiaki Kono
Journal:  Appl Environ Microbiol       Date:  2008-04-11       Impact factor: 4.792

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