Literature DB >> 10771422

Direct determination of the positions of the deuterium atoms of the bound water in -concanavalin A by neutron Laue crystallography.

J Habash1, J Raftery, R Nuttall, H J Price, C Wilkinson, A J Kalb, J R Helliwell.   

Abstract

The correct positions of the deuterium (D) atoms of many of the bound waters in the protein concanavalin A are revealed by neutron Laue diffraction. The approach includes cases where these water D atoms show enough mobility to render them invisible even to ultra-high resolution synchrotron-radiation X-ray crystallography. The positions of the bound water H atoms calculated on the basis of chemical and energetic considerations are often incorrect. The D-atom positions for the water molecules in the Mn-, Ca- and sugar-binding sites of concanavalin A are described in detail.

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Year:  2000        PMID: 10771422     DOI: 10.1107/s0907444900002353

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  19 in total

1.  Comparison of hydrogen determination with X-ray and neutron crystallography in a human aldose reductase-inhibitor complex.

Authors:  M P Blakeley; A Mitschler; I Hazemann; F Meilleur; D A A Myles; A Podjarny
Journal:  Eur Biophys J       Date:  2006-04-19       Impact factor: 1.733

2.  A model for water motion in crystals of lysozyme based on an incoherent quasielastic neutron-scattering study.

Authors:  C Bon; A J Dianoux; M Ferrand; M S Lehmann
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

3.  Neutron crystallographic study on rubredoxin from Pyrococcus furiosus by BIX-3, a single-crystal diffractometer for biomacromolecules.

Authors:  Kazuo Kurihara; Ichiro Tanaka; Toshiyuki Chatake; Michael W W Adams; Francis E Jenney; Natalia Moiseeva; Robert Bau; Nobuo Niimura
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-22       Impact factor: 11.205

4.  Getting protein solvent structures down cold.

Authors:  B Leif Hanson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-16       Impact factor: 11.205

5.  Joint X-ray and neutron refinement with phenix.refine.

Authors:  Pavel V Afonine; Marat Mustyakimov; Ralf W Grosse-Kunstleve; Nigel W Moriarty; Paul Langan; Paul D Adams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-10-20

6.  The 15-K neutron structure of saccharide-free concanavalin A.

Authors:  M P Blakeley; A J Kalb; J R Helliwell; D A A Myles
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-03       Impact factor: 11.205

7.  A quasi-Laue neutron crystallographic study of D-xylose isomerase.

Authors:  Flora Meilleur; Edward H Snell; Mark J van der Woerd; Russell A Judge; Dean A A Myles
Journal:  Eur Biophys J       Date:  2006-05-04       Impact factor: 1.733

Review 8.  Neutron Laue macromolecular crystallography.

Authors:  Flora Meilleur; Dean A A Myles; Matthew P Blakeley
Journal:  Eur Biophys J       Date:  2006-08-03       Impact factor: 1.733

9.  A preliminary neutron diffraction study of gamma-chymotrypsin.

Authors:  Walter R P Novak; Aaron G Moulin; Matthew P Blakeley; Ilme Schlichting; Gregory A Petsko; Dagmar Ringe
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-02-26

10.  Cryo-neutron crystallographic data collection and preliminary refinement of left-handed Z-DNA d(CGCGCG).

Authors:  Joel M Harp; Leighton Coates; Brendan Sullivan; Martin Egli
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-09-21       Impact factor: 1.056

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