Literature DB >> 10769125

Regulation of tryptophan synthase by temperature, monovalent cations, and an allosteric ligand. Evidence from Arrhenius plots, absorption spectra, and primary kinetic isotope effects.

Y X Fan1, P McPhie, E W Miles.   

Abstract

To investigate the linkage between enzyme conformation and catalysis, we have determined the effects of temperature on catalytic properties of the tryptophan synthase alpha(2)beta(2) complex and beta(2) subunit in the absence or presence of different monovalent cations (Cs(+), Na(+), and GuH(+)) and of an allosteric ligand, alpha-glycerol 3-phosphate. Arrhenius plots of the activity data between 5 and 50 degrees C are nonlinear in the presence of certain ligands but not others. The conditions that yield nonlinear Arrhenius plots also yield temperature-dependent changes in the equilibrium distribution of enzyme-substrate intermediates and in primary kinetic isotope effects. The results provide evidence that the nonlinear Arrhenius plots are caused by a temperature-dependent conformational change that precedes the rate-limiting step in catalysis. Thermodynamic analysis of the data associated with the conformational change shows that the activation energies are much higher at low temperatures than at high temperatures. We correlate the results with a model in which the enzyme is converted by increased temperature under certain conditions from a low-activity "open" conformation to a high-activity "closed" conformation. The allosteric ligand and different monovalent cations, including GuH(+), which also acts as a chaotropic agent, affect the equilibrium between the open and closed forms. The large positive entropy changes in the conformational conversion suggest that the closed conformation results from tightened hydrophobic interactions that exclude water from the active site of the beta subunit.

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Year:  2000        PMID: 10769125     DOI: 10.1021/bi9921586

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

1.  Effects of hydrostatic pressure on the conformational equilibrium of tryptophan synthase from Salmonella typhimurium.

Authors:  Robert S Phillips; Edith W Miles; Peter McPhie; Stephane Marchal; Reinhard Lange; Georg Holtermann; Roger S Goody
Journal:  Ann N Y Acad Sci       Date:  2010-02       Impact factor: 5.691

Review 2.  Allosteric regulation of substrate channeling and catalysis in the tryptophan synthase bienzyme complex.

Authors:  Michael F Dunn
Journal:  Arch Biochem Biophys       Date:  2012-02-02       Impact factor: 4.013

Review 3.  Tryptophan synthase: a mine for enzymologists.

Authors:  Samanta Raboni; Stefano Bettati; Andrea Mozzarelli
Journal:  Cell Mol Life Sci       Date:  2009-04-22       Impact factor: 9.261

4.  Severing of a hydrogen bond disrupts amino acid networks in the catalytically active state of the alpha subunit of tryptophan synthase.

Authors:  Jennifer M Axe; Kathleen F O'Rourke; Nicole E Kerstetter; Eric M Yezdimer; Yan M Chan; Alexander Chasin; David D Boehr
Journal:  Protein Sci       Date:  2014-12-11       Impact factor: 6.725

5.  The tryptophan synthase α2β2 complex: a model for substrate channeling, allosteric communication, and pyridoxal phosphate catalysis.

Authors:  Edith Wilson Miles
Journal:  J Biol Chem       Date:  2013-02-20       Impact factor: 5.157

6.  Tryptophan Synthase Uses an Atypical Mechanism To Achieve Substrate Specificity.

Authors:  Andrew R Buller; Paul van Roye; Javier Murciano-Calles; Frances H Arnold
Journal:  Biochemistry       Date:  2016-12-13       Impact factor: 3.162

7.  Directed Evolution Mimics Allosteric Activation by Stepwise Tuning of the Conformational Ensemble.

Authors:  Andrew R Buller; Paul van Roye; Jackson K B Cahn; Remkes A Scheele; Michael Herger; Frances H Arnold
Journal:  J Am Chem Soc       Date:  2018-05-17       Impact factor: 15.419

8.  Unlocking Reactivity of TrpB: A General Biocatalytic Platform for Synthesis of Tryptophan Analogues.

Authors:  David K Romney; Javier Murciano-Calles; Jöri E Wehrmüller; Frances H Arnold
Journal:  J Am Chem Soc       Date:  2017-07-28       Impact factor: 15.419

9.  Effective Expression of the Serratia marcescens Phospholipase A1 Gene in Escherichia coli BL21(DE3), Enzyme Characterization, and Crude Rapeseed Oil Degumming via a Free Enzyme Approach.

Authors:  Peizhou Yang; Yun Wu; Suwei Jiang; Zhi Zheng; Zhigang Hou; Dongdong Mu; Wei Xiao; Shaotong Jiang; Yung-Hun Yang
Journal:  Front Bioeng Biotechnol       Date:  2019-10-17

10.  Catalytically impaired TrpA subunit of tryptophan synthase from Chlamydia trachomatis is an allosteric regulator of TrpB.

Authors:  Karolina Michalska; Samantha Wellington; Natalia Maltseva; Robert Jedrzejczak; Nelly Selem-Mojica; L Rodrigo Rosas-Becerra; Francisco Barona-Gómez; Deborah T Hung; Andrzej Joachimiak
Journal:  Protein Sci       Date:  2021-06-16       Impact factor: 6.725

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