Literature DB >> 10728566

An RNA transcription-based amplification technique (NASBA) for the detection of viable Salmonella enterica.

S A Simpkins1, A B Chan, J Hays, B Pöpping, N Cook.   

Abstract

Possession of mRNA is indicative of cell viability. RTPCR is not appropriate for mRNA detection as it cannot unambiguously detect mRNA in a DNA background. The alternative amplification technique, NASBA, avoids the disadvantages of RTPCR. We have devised a method for detection of viable Salmonella enterica. This involves NASBA amplification of mRNA transcribed from the dnaK gene. Amplification of mRNA extracted from viable and heat-killed cells from the same population produced consistent and highly significant (P > 0.01) differences between the respective signals. The signal obtained from viable cells was completely eradicated by RNase treatment, while PCR amplification of treated and untreated samples was unaffected, indicating that NASBA was unaffected by background DNA.

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Year:  2000        PMID: 10728566     DOI: 10.1046/j.1472-765x.2000.00670.x

Source DB:  PubMed          Journal:  Lett Appl Microbiol        ISSN: 0266-8254            Impact factor:   2.858


  20 in total

Review 1.  Characteristics and applications of nucleic acid sequence-based amplification (NASBA).

Authors:  Birgit Deiman; Pierre van Aarle; Peter Sillekens
Journal:  Mol Biotechnol       Date:  2002-02       Impact factor: 2.695

Review 2.  Strategies for signal amplification in nucleic acid detection.

Authors:  S C Andras; J B Power; E C Cocking; M R Davey
Journal:  Mol Biotechnol       Date:  2001-09       Impact factor: 2.695

3.  Rapid detection of viable salmonellae in produce by coupling propidium monoazide with loop-mediated isothermal amplification.

Authors:  Siyi Chen; Fei Wang; John C Beaulieu; Rebecca E Stein; Beilei Ge
Journal:  Appl Environ Microbiol       Date:  2011-04-15       Impact factor: 4.792

4.  Quantification of SSX mRNA expression in human bone and soft tissue tumors using nucleic acid sequence-based amplification.

Authors:  Norifumi Naka; Susumu Joyama; Yoshitane Tsukamoto; Kiyoko Yoshioka; Nobuyuki Hashimoto; Takeshi Ujiiye; Tsukasa Hayashi; Masako Kawase; Masayuki Mano; Shingo Ishiguro; Akira Myoui; Takafumi Ueda; Hideki Yoshikawa; Nobuhito Araki; Kazuyuki Itoh
Journal:  J Mol Diagn       Date:  2005-05       Impact factor: 5.568

5.  Nucleic acid sequence-based amplification of Aspergillus RNA in blood samples.

Authors:  J Loeffler; H Hebart; P Cox; N Flues; U Schumacher; H Einsele
Journal:  J Clin Microbiol       Date:  2001-04       Impact factor: 5.948

6.  Detection of Aspergillus fumigatus in a rat model of invasive pulmonary aspergillosis by real-time nucleic acid sequence-based amplification.

Authors:  Yanan Zhao; Steven Park; Peter Warn; Raghdaa Shrief; Elizabeth Harrison; David S Perlin
Journal:  J Clin Microbiol       Date:  2010-02-03       Impact factor: 5.948

7.  Comparison of the RNA-amplification based methods RT-PCR and NASBA for the detection of circulating tumour cells.

Authors:  S A Burchill; L Perebolte; C Johnston; B Top; P Selby
Journal:  Br J Cancer       Date:  2002-01-07       Impact factor: 7.640

8.  Rapid real-time nucleic Acid sequence-based amplification-molecular beacon platform to detect fungal and bacterial bloodstream infections.

Authors:  Yanan Zhao; Steven Park; Barry N Kreiswirth; Christine C Ginocchio; Raphaël Veyret; Ali Laayoun; Alain Troesch; David S Perlin
Journal:  J Clin Microbiol       Date:  2009-04-29       Impact factor: 5.948

9.  Wireless, remote-query, and high sensitivity Escherichia coli O157:H7 biosensor based on the recognition action of concanavalin A.

Authors:  Qingzhu Lu; Hailan Lin; Shutian Ge; Shenglian Luo; Qingyun Cai; Craig A Grimes
Journal:  Anal Chem       Date:  2009-07-15       Impact factor: 6.986

10.  Influence of long time storage in mineral water on RNA stability of Pseudomonas aeruginosa and Escherichia coli after heat inactivation.

Authors:  Claire Cenciarini; Sophie Courtois; Didier Raoult; Bernard La Scola
Journal:  PLoS One       Date:  2008-10-20       Impact factor: 3.240

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