Literature DB >> 10723035

To be or not to be active: the stochastic nature of enhancer action.

S Fiering1, E Whitelaw, D I Martin.   

Abstract

Transcriptional enhancers are traditionally considered to regulate the rate at which a linked promoter transcribes mRNA, but recent experiments suggest a reevaluation of this model is necessary. Single-cell assays of transgenes reveal that enhancers increase the probability that a reporter gene will be active, but have little or no effect on the transcription rate once a gene has been activated. These results raise the question of how enhancers affect gene expression in their native contexts. A simple interpretation is that enhancers act in a stochastic fashion to increase the probability that a regulated gene will be transcribed; such a model is compatible with programs of cell differentiation in which multiple similar cells subject to similar environmental stimuli do not respond uniformly. Copyright 2000 John Wiley & Sons, Inc.

Mesh:

Year:  2000        PMID: 10723035     DOI: 10.1002/(SICI)1521-1878(200004)22:4<381::AID-BIES8>3.0.CO;2-E

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  54 in total

1.  Single allele mutations at the heart of congenital disease.

Authors:  N Rosenthal; R P Harvey
Journal:  J Clin Invest       Date:  1999-12       Impact factor: 14.808

2.  Position effects are influenced by the orientation of a transgene with respect to flanking chromatin.

Authors:  Y Q Feng; M C Lorincz; S Fiering; J M Greally; E E Bouhassira
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

3.  Random, asynchronous, and asymmetric transcriptional activity of enhancer-flanking major immediate-early genes ie1/3 and ie2 during murine cytomegalovirus latency in the lungs.

Authors:  N K Grzimek; D Dreis; S Schmalz; M J Reddehase
Journal:  J Virol       Date:  2001-03       Impact factor: 5.103

4.  Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion.

Authors:  A Becskei; B Séraphin; L Serrano
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

5.  A cell type-specific allele of the POU gene Oct-6 reveals Schwann cell autonomous function in nerve development and regeneration.

Authors:  Merhnaz Ghazvini; Wim Mandemakers; Martine Jaegle; Marko Piirsoo; Siska Driegen; Manousos Koutsourakis; Xsander Smit; Frank Grosveld; Dies Meijer
Journal:  EMBO J       Date:  2002-09-02       Impact factor: 11.598

6.  General statistics of stochastic process of gene expression in eukaryotic cells.

Authors:  V A Kuznetsov; G D Knott; R F Bonner
Journal:  Genetics       Date:  2002-07       Impact factor: 4.562

Review 7.  Lonely in Paris: when one gene copy isn't enough.

Authors:  Ramesh A Shivdasani
Journal:  J Clin Invest       Date:  2004-07       Impact factor: 14.808

8.  Memories of lost enhancers.

Authors:  Ranjan Sen; Rudolf Grosschedl
Journal:  Genes Dev       Date:  2010-05-15       Impact factor: 11.361

9.  Enhancerless cytomegalovirus is capable of establishing a low-level maintenance infection in severely immunodeficient host tissues but fails in exponential growth.

Authors:  Jürgen Podlech; Rares Pintea; Kai A Kropp; Annette Fink; Niels A W Lemmermann; Katja C Erlach; Elena Isern; Ana Angulo; Peter Ghazal; Matthias J Reddehase
Journal:  J Virol       Date:  2010-04-07       Impact factor: 5.103

Review 10.  Enhancer-promoter interference and its prevention in transgenic plants.

Authors:  Stacy D Singer; Kerik D Cox; Zongrang Liu
Journal:  Plant Cell Rep       Date:  2010-12-19       Impact factor: 4.570

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