Literature DB >> 10716735

A method to identify cDNAs based on localization of green fluorescent protein fusion products.

K Misawa1, T Nosaka, S Morita, A Kaneko, T Nakahata, S Asano, T Kitamura.   

Abstract

We previously established a high-efficiency, retrovirus-mediated expression cloning method. Using this system, we now have developed an expression cloning method (FL-REX; fluorescence localization-based retrovirus-mediated expression cloning) in which cDNAs can be isolated based on the subcellular localization of their protein products. Complementary DNAs generated from mRNA using random hexamers were fused to the cDNA of green fluorescent protein (GFP) in the pMX retrovirus vector. The resulting cDNA-GFP fusion library was transfected into retrovirus-packaging cells, and the derived retroviruses were used to infect NIH 3T3 cells. Infected cells then were screened to identify cDNAs of interest through the subcellular localization of the GFP-fusion products. Using FL-REX, we have identified 25 cDNAs, most of which showed reasonable subcellular localization as GFP-fusion proteins, indicating that FL-REX is useful for identification of proteins that show specific intracellular localization.

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Year:  2000        PMID: 10716735      PMCID: PMC16192          DOI: 10.1073/pnas.97.7.3062

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Packaging system for rapid production of murine leukemia virus vectors with variable tropism.

Authors:  N R Landau; D R Littman
Journal:  J Virol       Date:  1992-08       Impact factor: 5.103

2.  Improved retroviral vectors for gene transfer and expression.

Authors:  A D Miller; G J Rosman
Journal:  Biotechniques       Date:  1989-10       Impact factor: 1.993

3.  Production of high-titer helper-free retroviruses by transient transfection.

Authors:  W S Pear; G P Nolan; M L Scott; D Baltimore
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

4.  Advanced mammalian gene transfer: high titre retroviral vectors with multiple drug selection markers and a complementary helper-free packaging cell line.

Authors:  J P Morgenstern; H Land
Journal:  Nucleic Acids Res       Date:  1990-06-25       Impact factor: 16.971

5.  Efficient screening of retroviral cDNA expression libraries.

Authors:  T Kitamura; M Onishi; S Kinoshita; A Shibuya; A Miyajima; G P Nolan
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

6.  A simple and efficient procedure for generating stable expression libraries by cDNA cloning in a retroviral vector.

Authors:  J R Rayner; T J Gonda
Journal:  Mol Cell Biol       Date:  1994-02       Impact factor: 4.272

7.  Expression cloning of oncogenes by retroviral transfer of cDNA libraries.

Authors:  I Whitehead; H Kirk; R Kay
Journal:  Mol Cell Biol       Date:  1995-02       Impact factor: 4.272

8.  STAT5 as a molecular regulator of proliferation, differentiation and apoptosis in hematopoietic cells.

Authors:  T Nosaka; T Kawashima; K Misawa; K Ikuta; A L Mui; T Kitamura
Journal:  EMBO J       Date:  1999-09-01       Impact factor: 11.598

9.  Vaccination with irradiated tumor cells engineered to secrete murine granulocyte-macrophage colony-stimulating factor stimulates potent, specific, and long-lasting anti-tumor immunity.

Authors:  G Dranoff; E Jaffee; A Lazenby; P Golumbek; H Levitsky; K Brose; V Jackson; H Hamada; D Pardoll; R C Mulligan
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-15       Impact factor: 11.205

10.  A visual screen of a GFP-fusion library identifies a new type of nuclear envelope membrane protein.

Authors:  M M Rolls; P A Stein; S S Taylor; E Ha; F McKeon; T A Rapoport
Journal:  J Cell Biol       Date:  1999-07-12       Impact factor: 10.539

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  16 in total

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Authors:  X Morin; R Daneman; M Zavortink; W Chia
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-11       Impact factor: 11.205

Review 2.  Addressing protein localization within the nucleus.

Authors:  Wendy A Bickmore; Heidi G E Sutherland
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3.  High-throughput viral expression of cDNA-green fluorescent protein fusions reveals novel subcellular addresses and identifies unique proteins that interact with plasmodesmata.

Authors:  Nieves Medina Escobar; Sophie Haupt; Graham Thow; Petra Boevink; Sean Chapman; Karl Oparka
Journal:  Plant Cell       Date:  2003-07       Impact factor: 11.277

4.  Chromatin remodeling and histone modification in the conversion of oligodendrocyte precursors to neural stem cells.

Authors:  Toru Kondo; Martin Raff
Journal:  Genes Dev       Date:  2004-12-01       Impact factor: 11.361

5.  Domain analyses of the Runx1 transcription factor responsible for modulating T-cell receptor-beta/CD4 and interleukin-4/interferon-gamma expression in CD4(+) peripheral T lymphocytes.

Authors:  Ryuji Uchino
Journal:  Immunology       Date:  2009-09       Impact factor: 7.397

Review 6.  Tetrahymena as a Unicellular Model Eukaryote: Genetic and Genomic Tools.

Authors:  Marisa D Ruehle; Eduardo Orias; Chad G Pearson
Journal:  Genetics       Date:  2016-06       Impact factor: 4.562

7.  Reversible protein inactivation by optogenetic trapping in cells.

Authors:  Sangkyu Lee; Hyerim Park; Taeyoon Kyung; Na Yeon Kim; Sungsoo Kim; Jihoon Kim; Won Do Heo
Journal:  Nat Methods       Date:  2014-05-04       Impact factor: 28.547

Review 8.  Protein trap: a new Swiss army knife for geneticists?

Authors:  Svetlana A Fedorova; Natalya V Dorogova
Journal:  Mol Biol Rep       Date:  2019-11-14       Impact factor: 2.316

9.  Histone deacetylase inhibition-mediated neuronal differentiation of multipotent adult neural progenitor cells.

Authors:  Jenny Hsieh; Kinichi Nakashima; Tomoko Kuwabara; Eunice Mejia; Fred H Gage
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-10       Impact factor: 11.205

10.  A flow cytometric assay for the study of E3 ubiquitin ligase activity.

Authors:  Joshua G Hilliard; Anne L Cooper; Joyce G Slusser; David J Davido
Journal:  Cytometry A       Date:  2009-07       Impact factor: 4.355

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