Literature DB >> 8289827

A simple and efficient procedure for generating stable expression libraries by cDNA cloning in a retroviral vector.

J R Rayner1, T J Gonda.   

Abstract

cDNA expression cloning is a powerful method for the rescue and identification of genes that are able to confer a readily identifiable phenotype on specific cell types. Retroviral vectors provide several advantages over DNA-mediated gene transfer for the introduction of expression libraries into eukaryotic cells since they can be used to express genes in a wide range of cell types, including those that form important experimental systems such as the hemopoietic system. We describe here a straightforward and efficient method for generating expression libraries by using a murine retroviral vector. Essentially, the method involves the directional cloning of cDNA into the retroviral vector and the generation of pools of stable ecotropic virus producing cells from this DNA. The cells so derived constitute the library, and the virus they yield is used to infect appropriate target cells for subsequent functional screening. We have demonstrated the feasibility of this procedure by constructing several large retroviral libraries (10(5) to 10(6) individual clones) and then using one of these libraries to isolate cDNAs for interleukin-3 and granulocyte-macrophage colony-stimulating factor on the basis of the ability of these factors to confer autonomous growth on the factor-dependent hemopoietic cell line FDC-P1. Moreover, the frequency at which these factor-independent clones were isolated approximated the frequency at which they were represented in the original plasmid library. These results suggest that expression cloning with retroviruses is a practical and efficient procedure and should be a valuable method for the isolation of important regulatory genes.

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Year:  1994        PMID: 8289827      PMCID: PMC358442          DOI: 10.1128/mcb.14.2.880-887.1994

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  39 in total

1.  Long terminal repeat sequences impart hematopoietic transformation properties to the myeloproliferative sarcoma virus.

Authors:  C Stocking; R Kollek; U Bergholz; W Ostertag
Journal:  Proc Natl Acad Sci U S A       Date:  1985-09       Impact factor: 11.205

2.  Safe and efficient generation of recombinant retroviruses with amphotropic and ecotropic host ranges.

Authors:  O Danos; R C Mulligan
Journal:  Proc Natl Acad Sci U S A       Date:  1988-09       Impact factor: 11.205

3.  Comparison of expression in hemopoietic cells by retroviral vectors carrying two genes.

Authors:  D D Bowtell; S Cory; G R Johnson; T J Gonda
Journal:  J Virol       Date:  1988-07       Impact factor: 5.103

4.  Three abundance classes in HeLa cell messenger RNA.

Authors:  J O Bishop; J G Morton; M Rosbash; M Richardson
Journal:  Nature       Date:  1974-07-19       Impact factor: 49.962

5.  Construction of a retrovirus packaging mutant and its use to produce helper-free defective retrovirus.

Authors:  R Mann; R C Mulligan; D Baltimore
Journal:  Cell       Date:  1983-05       Impact factor: 41.582

6.  Autocrine stimulation after transfer of the granulocyte/macrophage colony-stimulating factor gene and autonomous growth are distinct but interdependent steps in the oncogenic pathway.

Authors:  C Laker; C Stocking; U Bergholz; N Hess; J F De Lamarter; W Ostertag
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

7.  Glucocorticoid inhibition of lymphokine secretion by alloreactive T lymphocyte clones.

Authors:  A Kelso; A Munck
Journal:  J Immunol       Date:  1984-08       Impact factor: 5.422

8.  Nonneoplastic hematopoietic myeloproliferative syndrome induced by dysregulated multi-CSF (IL-3) expression.

Authors:  J M Chang; D Metcalf; R A Lang; T J Gonda; G R Johnson
Journal:  Blood       Date:  1989-05-01       Impact factor: 22.113

9.  A lethal myeloproliferative syndrome in mice transplanted with bone marrow cells infected with a retrovirus expressing granulocyte-macrophage colony stimulating factor.

Authors:  G R Johnson; T J Gonda; D Metcalf; I K Hariharan; S Cory
Journal:  EMBO J       Date:  1989-02       Impact factor: 11.598

10.  Structure of the chromosomal gene for granulocyte-macrophage colony stimulating factor: comparison of the mouse and human genes.

Authors:  S Miyatake; T Otsuka; T Yokota; F Lee; K Arai
Journal:  EMBO J       Date:  1985-10       Impact factor: 11.598

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  19 in total

1.  Selection of functional tRNA primers and primer binding site sequences from a retroviral combinatorial library: identification of new functional tRNA primers in murine leukemia virus replication.

Authors:  A H Lund; M Duch; F S Pedersen
Journal:  Nucleic Acids Res       Date:  2000-02-01       Impact factor: 16.971

2.  Functional cloning using pFB retroviral cDNA expression libraries.

Authors:  Katherine A Felts; Keith Chen; Kim Zaharee; Latha Sundar; Jamie Limjoco; Anna Miller; Peter Vaillancourt
Journal:  Mol Biotechnol       Date:  2002-09       Impact factor: 2.695

3.  Novel retroviral vectors to facilitate expression screens in mammalian cells.

Authors:  Eugene Y Koh; Tong Chen; George Q Daley
Journal:  Nucleic Acids Res       Date:  2002-12-15       Impact factor: 16.971

4.  Identification of immature podocyte specific antigen using retrovirus-mediated gene transfer and cell sorting.

Authors:  Joichi Usui; Mitsujiro Osawa; Satoshi Yamazaki; Yohei Morita; Akio Koyama; Hiromitsu Nakauchi
Journal:  Clin Exp Nephrol       Date:  2005-12       Impact factor: 2.801

5.  Efficient recovery and regeneration of integrated retroviruses.

Authors:  B Schott; E S Kandel; I B Roninson
Journal:  Nucleic Acids Res       Date:  1997-07-15       Impact factor: 16.971

Review 6.  In vivo functional screening for systems-level integrative cancer genomics.

Authors:  Julia Weber; Christian J Braun; Dieter Saur; Roland Rad
Journal:  Nat Rev Cancer       Date:  2020-07-07       Impact factor: 60.716

7.  Efficient screening of retroviral cDNA expression libraries.

Authors:  T Kitamura; M Onishi; S Kinoshita; A Shibuya; A Miyajima; G P Nolan
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

8.  Expression cloning of oncogenes by retroviral transfer of cDNA libraries.

Authors:  I Whitehead; H Kirk; R Kay
Journal:  Mol Cell Biol       Date:  1995-02       Impact factor: 4.272

9.  Mutational analyses of the SOCS proteins suggest a dual domain requirement but distinct mechanisms for inhibition of LIF and IL-6 signal transduction.

Authors:  S E Nicholson; T A Willson; A Farley; R Starr; J G Zhang; M Baca; W S Alexander; D Metcalf; D J Hilton; N A Nicola
Journal:  EMBO J       Date:  1999-01-15       Impact factor: 11.598

10.  Construction of a high-performance human fetal liver-derived lentiviral cDNA library.

Authors:  Ryo Kurita; Tatsuo Oikawa; Michiyo Okada; Tomoko Yokoo; Yuusuke Kurihara; Yuko Honda; Rui Kageyama; Youko Suehiro; Toshihiko Okazaki; Mutsunori Iga; Hiroyuki Miyoshi; Kenzaburo Tani
Journal:  Mol Cell Biochem       Date:  2008-08-15       Impact factor: 3.396

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