Literature DB >> 10692304

Transduction of intracellular and intercellular dynamics in yeast glycolytic oscillations.

J Wolf1, J Passarge, O J Somsen, J L Snoep, R Heinrich, H V Westerhoff.   

Abstract

Under certain well-defined conditions, a population of yeast cells exhibits glycolytic oscillations that synchronize through intercellular acetaldehyde. This implies that the dynamic phenomenon of the oscillation propagates within and between cells. We here develop a method to establish by which route dynamics propagate through a biological reaction network. Application of the method to yeast demonstrates how the oscillations and the synchronization signal can be transduced. That transduction is not so much through the backbone of glycolysis, as via the Gibbs energy and redox coenzyme couples (ATP/ADP, and NADH/NAD), and via both intra- and intercellular acetaldehyde.

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Year:  2000        PMID: 10692304      PMCID: PMC1300717          DOI: 10.1016/S0006-3495(00)76672-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  18 in total

1.  Model of intercellular calcium oscillations in hepatocytes: synchronization of heterogeneous cells.

Authors:  T Höfer
Journal:  Biophys J       Date:  1999-09       Impact factor: 4.033

2.  Effect of cellular interaction on glycolytic oscillations in yeast: a theoretical investigation.

Authors:  J Wolf; R Heinrich
Journal:  Biochem J       Date:  2000-01-15       Impact factor: 3.857

3.  Mathematical analysis of multienzyme systems. II. Steady state and transient control.

Authors:  R Heinrich; T A Rapoport
Journal:  Biosystems       Date:  1975-07       Impact factor: 1.973

4.  Stabilization of energy charge, generation of oscillations and multiple steady states in energy metabolism as a result of purely stoichiometric regulation.

Authors:  E E Sel'kov
Journal:  Eur J Biochem       Date:  1975-11-01

5.  PHASE RELATIONSHIP OF GLYCOLYTIC INTERMEDIATES IN YEAST CELLS WITH OSCILLATORY METABOLIC CONTROL.

Authors:  A BETZ; B CHANCE
Journal:  Arch Biochem Biophys       Date:  1965-03       Impact factor: 4.013

6.  Fluorescence spectrophotometry of reduced phosphopyridine nucleotide in intact cells in the near-ultraviolet and visible region.

Authors:  L N DUYSENS; J AMESZ
Journal:  Biochim Biophys Acta       Date:  1957-04

7.  Control of frequency and amplitudes is shared by all enzymes in three models for yeast glycolytic oscillations.

Authors:  B Teusink; B M Bakker; H V Westerhoff
Journal:  Biochim Biophys Acta       Date:  1996-07-31

8.  Dynamics of two-component biochemical systems in interacting cells; synchronization and desynchronization of oscillations and multiple steady states.

Authors:  J Wolf; R Heinrich
Journal:  Biosystems       Date:  1997       Impact factor: 1.973

9.  Control analysis of glycolytic oscillations.

Authors:  M Bier; B Teusink; B N Kholodenko; H V Westerhoff
Journal:  Biophys Chem       Date:  1996-11-29       Impact factor: 2.352

10.  Acetaldehyde mediates the synchronization of sustained glycolytic oscillations in populations of yeast cells.

Authors:  P Richard; B M Bakker; B Teusink; K Van Dam; H V Westerhoff
Journal:  Eur J Biochem       Date:  1996-01-15
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  22 in total

1.  Control analysis for autonomously oscillating biochemical networks.

Authors:  Karin A Reijenga; Hans V Westerhoff; Boris N Kholodenko; Jacky L Snoep
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

2.  Cell population modelling of yeast glycolytic oscillations.

Authors:  Michael A Henson; Dirk Müller; Matthias Reuss
Journal:  Biochem J       Date:  2002-12-01       Impact factor: 3.857

3.  Timescales of IP(3)-evoked Ca(2+) spikes emerge from Ca(2+) puffs only at the cellular level.

Authors:  Kevin Thurley; Ian F Smith; Stephen C Tovey; Colin W Taylor; Ian Parker; Martin Falcke
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

4.  Structural kinetic modeling of metabolic networks.

Authors:  Ralf Steuer; Thilo Gross; Joachim Selbig; Bernd Blasius
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-31       Impact factor: 11.205

5.  Equivalence of branched and unbranched Michaelian pathways concerning periodic signal transmission.

Authors:  Yoel Rodríguez; Antonio S Torralba; Francisco Montero
Journal:  Mol Biol Rep       Date:  2002       Impact factor: 2.316

6.  An equation-free approach to analyzing heterogeneous cell population dynamics.

Authors:  Katherine A Bold; Yu Zou; Ioannis G Kevrekidis; Michael A Henson
Journal:  J Math Biol       Date:  2007-04-11       Impact factor: 2.259

7.  Dynamical quorum sensing: Population density encoded in cellular dynamics.

Authors:  Silvia De Monte; Francesco d'Ovidio; Sune Danø; Preben Graae Sørensen
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

8.  Synchronization of metabolic oscillations:two cells and ensembles of adsorbed cells.

Authors:  V P Zhdanov; B Kasemo
Journal:  J Biol Phys       Date:  2001-12       Impact factor: 1.365

9.  Control of glycolytic oscillations by temperature.

Authors:  Thomas Mair; Christian Warnke; Kinko Tsuji; Stefan C Müller
Journal:  Biophys J       Date:  2004-10-15       Impact factor: 4.033

Review 10.  Quantitative analysis of cellular metabolic dissipative, self-organized structures.

Authors:  Ildefonso Martínez de la Fuente
Journal:  Int J Mol Sci       Date:  2010-09-27       Impact factor: 5.923

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