Literature DB >> 10679372

Design of novel sequence-specific DNA-binding proteins.

D J Segal1, C F Barbas.   

Abstract

The design and selection of DNA-binding proteins or individual domains capable of novel sequence recognition continues to make great strides. Recent studies have also highlighted the role of the non-DNA-contacting portions of the protein and the optimal assembly of the domains. For the first time, it appears that it is possible to produce proteins capable of targeting any gene with an 18 base pair recognition domain. A variety of applications are being explored, such as targeted transcriptional regulation, recombination and viral integration. These proteins will probably find diverse applications in gene therapy, functional genomics, and agriculture.

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Year:  2000        PMID: 10679372     DOI: 10.1016/s1367-5931(99)00048-4

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  15 in total

1.  Concerted evolution of structure and function in a miniature protein.

Authors:  J W Chin; A Schepartz
Journal:  J Am Chem Soc       Date:  2001-03-28       Impact factor: 15.419

2.  Genomic targets of the KRAB and SCAN domain-containing zinc finger protein 263.

Authors:  Seth Frietze; Xun Lan; Victor X Jin; Peggy J Farnham
Journal:  J Biol Chem       Date:  2009-11-02       Impact factor: 5.157

3.  Acridine-N peptide conjugates display enhanced affinity and specificity for boxB RNA targets.

Authors:  Xin Qi; Tianbing Xia; Richard W Roberts
Journal:  Biochemistry       Date:  2010-07-13       Impact factor: 3.162

4.  Using ChIP-seq technology to identify targets of zinc finger transcription factors.

Authors:  Henriette O'Geen; Seth Frietze; Peggy J Farnham
Journal:  Methods Mol Biol       Date:  2010

5.  Structure-based design of a dimeric RNA-peptide complex.

Authors:  D M Campisi; V Calabro; A D Frankel
Journal:  EMBO J       Date:  2001-01-15       Impact factor: 11.598

6.  Electrostatic control of half-site spacing preferences by the cyclic AMP response element-binding protein CREB.

Authors:  J K Montclare; L S Sloan; A Schepartz
Journal:  Nucleic Acids Res       Date:  2001-08-15       Impact factor: 16.971

Review 7.  Mini review: protein-protein interactions in transcription: a fertile ground for helix mimetics.

Authors:  Danielle A Guarracino; Brooke N Bullock; Paramjit S Arora
Journal:  Biopolymers       Date:  2011-01       Impact factor: 2.505

Review 8.  Reprogramming cell fate with artificial transcription factors.

Authors:  Evan A Heiderscheit; Asuka Eguchi; Mackenzie C Spurgat; Aseem Z Ansari
Journal:  FEBS Lett       Date:  2018-02-11       Impact factor: 4.124

9.  Exploring the recognition of quadruplex DNA by an engineered Cys2-His2 zinc finger protein.

Authors:  Sylvain Ladame; James A Schouten; Jose Roldan; James E Redman; Stephen Neidle; Shankar Balasubramanian
Journal:  Biochemistry       Date:  2006-02-07       Impact factor: 3.162

10.  Chiral introduction of positive charges to PNA for double-duplex invasion to versatile sequences.

Authors:  Takumi Ishizuka; Junya Yoshida; Yoji Yamamoto; Jun Sumaoka; Tullia Tedeschi; Roberto Corradini; Stefano Sforza; Makoto Komiyama
Journal:  Nucleic Acids Res       Date:  2008-01-18       Impact factor: 16.971

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