Literature DB >> 10672513

The structure of the avian fast skeletal muscle troponin T gene: seven novel tandem-arranged exons in the exon x region.

J Miyazaki1, M Jozaki, N Nakatani, T Watanabe, R Saba, K Nakada, T Hirabayashi, I Yonemura.   

Abstract

To elucidate the mechanism that produces enormous molecular diversity in troponin T (TnT) of fast skeletal muscle, we determined the 5'-half genomic sequence of the chicken fast muscle TnT gene. The sequence of ca. 16 kb included seven exons (exons 1, 2, 3, 4, w, 5, and 6), which have been reported previously and presumed by sequencing TnT cDNAs. Additionally we found six 15 nt and one 18 nt sequences in the region between exons 5 and 6 (i.e. the exon x region). They were encompassed by consensus splice donor and acceptor sites and preceded by putative branch sites, and designated herein as exons xa to xg. Our result shows that the sequence derived from exons x1, x2, and x3, the exons presumed previously by cDNA sequencing, is actually encoded by the seven exons xa to xg, establishing the precise gene structure in the exon x region. Based on our data, together with that on the 3'-half genomic sequence of the quail fast muscle TnT gene, we conclude that the avian fast skeletal muscle TnT gene includes 27 exons, 16 of which are alternatively spliced.

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Year:  1999        PMID: 10672513     DOI: 10.1023/a:1005504018059

Source DB:  PubMed          Journal:  J Muscle Res Cell Motil        ISSN: 0142-4319            Impact factor:   2.698


  13 in total

1.  Tissue-specific distribution of breast-muscle-type and leg-muscle-type troponin T isoforms in birds.

Authors:  F Kimura; K Nakada; I Yonemura; T Hirabayashi; J I Miyazaki
Journal:  Biochim Biophys Acta       Date:  1999-02-02

2.  Expression pattern of skeletal muscle troponin T isoforms is fixed in cell lineage.

Authors:  Y Yao; M Nakamura; J I Miyazaki; M Kirinoki; T Hirabayashi
Journal:  Dev Biol       Date:  1992-06       Impact factor: 3.582

3.  Developmental and muscle-specific regulation of avian fast skeletal troponin T isoform expression by mRNA splicing.

Authors:  E A Bucher; F C de la Brousse; C P Emerson
Journal:  J Biol Chem       Date:  1989-07-25       Impact factor: 5.157

4.  Purification and properties of the components from troponin.

Authors:  M L Greaser; J Gergely
Journal:  J Biol Chem       Date:  1973-03-25       Impact factor: 5.157

5.  Sequences of complete cDNAs encoding four variants of chicken skeletal muscle troponin T.

Authors:  L B Smillie; K Golosinska; F C Reinach
Journal:  J Biol Chem       Date:  1988-12-15       Impact factor: 5.157

6.  Regulation of troponin T gene expression in chicken fast skeletal muscle: involvement of an M-CAT-like element distinct from the standard M-CAT.

Authors:  T Watanabe; T Takemasa; I Yonemura; T Hirabayashi
Journal:  J Biochem       Date:  1997-02       Impact factor: 3.387

7.  Chicken perinatal troponin Ts are generated by a combination of novel and phylogenetically conserved alternative splicing pathways.

Authors:  F Schachat; J M Schmidt; M Maready; M M Briggs
Journal:  Dev Biol       Date:  1995-09       Impact factor: 3.582

8.  Signals for the selection of a splice site in pre-mRNA. Computer analysis of splice junction sequences and like sequences.

Authors:  Y Ohshima; Y Gotoh
Journal:  J Mol Biol       Date:  1987-05-20       Impact factor: 5.469

9.  An unusual metal-binding cluster found exclusively in the avian breast muscle troponin T of Galliformes and Craciformes.

Authors:  J P Jin; L B Smillie
Journal:  FEBS Lett       Date:  1994-03-14       Impact factor: 4.124

10.  Novel developmentally regulated exon identified in the rat fast skeletal muscle troponin T gene.

Authors:  M J Morgan; J C Earnshaw; G K Dhoot
Journal:  J Cell Sci       Date:  1993-11       Impact factor: 5.285

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  5 in total

1.  Differential expression of mutually exclusive exons of the fast skeletal muscle troponin T gene in the chicken wing and leg muscles.

Authors:  Miho Jozaki; Kouji Hosoda; Jun-Ichi Miyazaki
Journal:  J Muscle Res Cell Motil       Date:  2002       Impact factor: 2.698

Review 2.  Troponin T isoforms and posttranscriptional modifications: Evolution, regulation and function.

Authors:  Bin Wei; J-P Jin
Journal:  Arch Biochem Biophys       Date:  2010-10-18       Impact factor: 4.013

3.  The gradual expression of troponin T isoforms in chicken wing muscles.

Authors:  J I Miyazaki; S Akutsu; N Satow; C Hirao; Y Yao
Journal:  J Muscle Res Cell Motil       Date:  2001       Impact factor: 2.698

Review 4.  TNNT1, TNNT2, and TNNT3: Isoform genes, regulation, and structure-function relationships.

Authors:  Bin Wei; J-P Jin
Journal:  Gene       Date:  2016-01-13       Impact factor: 3.688

Review 5.  Protein Structure-Function Relationship at Work: Learning from Myopathy Mutations of the Slow Skeletal Muscle Isoform of Troponin T.

Authors:  Anupom Mondal; J-P Jin
Journal:  Front Physiol       Date:  2016-10-13       Impact factor: 4.566

  5 in total

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