Literature DB >> 10655066

Heritable and inducible genetic interference by double-stranded RNA encoded by transgenes.

N Tavernarakis1, S L Wang, M Dorovkov, A Ryazanov, M Driscoll.   

Abstract

Double-stranded RNA interference (RNAi) is an effective method for disrupting expression of specific genes in Caenorhabditis elegans and other organisms. Applications of this reverse-genetics tool, however, are somewhat restricted in nematodes because introduced dsRNA is not stably inherited. Another difficulty is that RNAi disruption of late-acting genes has been generally less consistent than that of embryonically expressed genes, perhaps because the concentration of dsRNA becomes lower as cellular division proceeds or as developmental time advances. In particular, some neuronally expressed genes appear refractory to dsRNA-mediated interference. We sought to extend the applicability of RNAi by in vivo expression of heritable inverted-repeat (IR) genes. We assayed the efficacy of in vivo-driven RNAi in three situations for which heritable, inducible RNAi would be advantageous: (i) production of large numbers of animals deficient for gene activities required for viability or reproduction; (ii) generation of large populations of phenocopy mutants for biochemical analysis; and (iii) effective gene inactivation in the nervous system. We report that heritable IR genes confer potent and specific gene inactivation for each of these applications. We suggest that a similar strategy might be used to test for dsRNA interference effects in higher organisms in which it is feasible to construct transgenic animals, but impossible to directly or transiently introduce high concentrations of dsRNA.

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Year:  2000        PMID: 10655066     DOI: 10.1038/72850

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  99 in total

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Journal:  Genetics       Date:  2000-12       Impact factor: 4.562

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Journal:  Genetics       Date:  2002-01       Impact factor: 4.562

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

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Authors:  Patrick J Paddison; Amy A Caudy; Emily Bernstein; Gregory J Hannon; Douglas S Conklin
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5.  Induction of RNA interference in Caenorhabditis elegans by RNAs derived from plants exhibiting post-transcriptional gene silencing.

Authors:  Alexandra Boutla; Kriton Kalantidis; Nektarios Tavernarakis; Mina Tsagris; Martin Tabler
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

6.  A DNA vector-based RNAi technology to suppress gene expression in mammalian cells.

Authors:  Guangchao Sui; Christina Soohoo; El Bachir Affar; Frédérique Gay; Yujiang Shi; William C Forrester; Yang Shi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

7.  Absence of transitive and systemic pathways allows cell-specific and isoform-specific RNAi in Drosophila.

Authors:  Jean-Yves Roignant; Clément Carré; Bruno Mugat; Dimitri Szymczak; Jean-Antoine Lepesant; Christophe Antoniewski
Journal:  RNA       Date:  2003-03       Impact factor: 4.942

8.  Distinct and redundant functions of mu1 medium chains of the AP-1 clathrin-associated protein complex in the nematode Caenorhabditis elegans.

Authors:  J Shim; P W Sternberg; J Lee
Journal:  Mol Biol Cell       Date:  2000-08       Impact factor: 4.138

9.  Caenorhabditis elegans VEM-1, a novel membrane protein, regulates the guidance of ventral nerve cord-associated axons.

Authors:  Erik Runko; Zaven Kaprielian
Journal:  J Neurosci       Date:  2004-10-13       Impact factor: 6.167

10.  Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library.

Authors:  Jean-François Rual; Julian Ceron; John Koreth; Tong Hao; Anne-Sophie Nicot; Tomoko Hirozane-Kishikawa; Jean Vandenhaute; Stuart H Orkin; David E Hill; Sander van den Heuvel; Marc Vidal
Journal:  Genome Res       Date:  2004-10       Impact factor: 9.043

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