Literature DB >> 10620305

A thermodynamic molecular switch in biological systems: ribonuclease S' fragment complementation reactions.

P W Chun1.   

Abstract

It is well known that essentially all biological systems function over a very narrow temperature range. Most typical macromolecular interactions show DeltaH degrees (T) positive (unfavorable) and a positive DeltaS degrees (T) (favorable) at low temperature, because of a positive (DeltaCp degrees /T). Because DeltaG degrees (T) for biological systems shows a complicated behavior, wherein DeltaG degrees (T) changes from positive to negative, then reaches a negative value of maximum magnitude (favorable), and finally becomes positive as temperature increases, it is clear that a deeper-lying thermodynamic explanation is required. This communication demonstrates that the critical factor is a temperature-dependent DeltaCp degrees (T) (heat capacity change) of reaction that is positive at low temperature but switches to a negative value at a temperature well below the ambient range. Thus the thermodynamic molecular switch determines the behavior patterns of the Gibbs free energy change and hence a change in the equilibrium constant, K(eq), and/or spontaneity. The subsequent, mathematically predictable changes in DeltaH degrees (T), DeltaS degrees (T), DeltaW degrees (T), and DeltaG degrees (T) give rise to the classically observed behavior patterns in biological reactivity, as may be seen in ribonuclease S' fragment complementation reactions.

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Year:  2000        PMID: 10620305      PMCID: PMC1300649          DOI: 10.1016/S0006-3495(00)76604-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  9 in total

1.  A scanning calorimetric study of the thermal denaturation of the lysozyme of phage T4 and the Arg 96----His mutant form thereof.

Authors:  S Kitamura; J M Sturtevant
Journal:  Biochemistry       Date:  1989-05-02       Impact factor: 3.162

2.  Heat capacity changes for protein-peptide interactions in the ribonuclease S system.

Authors:  R Varadarajan; P R Connelly; J M Sturtevant; F M Richards
Journal:  Biochemistry       Date:  1992-02-11       Impact factor: 3.162

3.  Thermodynamics of protein-peptide interactions in the ribonuclease S system studied by titration calorimetry.

Authors:  P R Connelly; R Varadarajan; J M Sturtevant; F M Richards
Journal:  Biochemistry       Date:  1990-06-26       Impact factor: 3.162

4.  A differential scanning calorimetric study of the thermal unfolding of seven mutant forms of phage T4 lysozyme.

Authors:  P Connelly; L Ghosaini; C Q Hu; S Kitamura; A Tanaka; J M Sturtevant
Journal:  Biochemistry       Date:  1991-02-19       Impact factor: 3.162

5.  Application of Planck-Benzinger relationships to biology.

Authors:  P W Chun
Journal:  Methods Enzymol       Date:  1998       Impact factor: 1.600

6.  Thermodynamics, chemical reactions and molecular biology.

Authors:  T H Benzinger
Journal:  Nature       Date:  1971-01-08       Impact factor: 49.962

Review 7.  Aromatic-aromatic interaction: a mechanism of protein structure stabilization.

Authors:  S K Burley; G A Petsko
Journal:  Science       Date:  1985-07-05       Impact factor: 47.728

8.  New thermodynamic studies on ribonuclease A at low pH.

Authors:  P W Chun
Journal:  J Biol Chem       Date:  1995-06-09       Impact factor: 5.157

9.  Significant discrepancies between van't Hoff and calorimetric enthalpies.

Authors:  H Naghibi; A Tamura; J M Sturtevant
Journal:  Proc Natl Acad Sci U S A       Date:  1995-06-06       Impact factor: 11.205

  9 in total
  2 in total

1.  Molecular-level thermodynamic switch controls chemical equilibrium in sequence-specific hydrophobic interaction of 35 dipeptide pairs.

Authors:  Paul W Chun
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

2.  Planck-Benzinger thermal work function: thermodynamic characterization of the carboxy-terminus of p53 peptide fragments.

Authors:  Paul W Chun; Marc S Lewis
Journal:  Protein J       Date:  2010-11       Impact factor: 2.371

  2 in total

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