Literature DB >> 1736999

Heat capacity changes for protein-peptide interactions in the ribonuclease S system.

R Varadarajan1, P R Connelly, J M Sturtevant, F M Richards.   

Abstract

Two fragments of pancreatic ribonuclease A, a truncated version of S-peptide (residues 1-15) and S-protein (residues 21-124), combine to give a catalytically active complex designated ribonuclease S. We have substituted the wild-type residue Met-13 with six other hydrophobic residues ranging in size from alanine to phenylalanine and have determined the thermodynamic parameters associated with binding of these analogues to S-protein by titration calorimetry in the temperature range 5-25 degrees C. The heat capacity change (delta Cp) associated with binding was obtained from a global analysis of the temperature dependences of the free energies and enthalpies of binding. The delta Cp's were not correlated in any simple fashion with the nonpolar surface area (delta Anp) buried upon binding.

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Year:  1992        PMID: 1736999     DOI: 10.1021/bi00120a019

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  19 in total

1.  Native-state hydrogen-exchange studies of a fragment complex can provide structural information about the isolated fragments.

Authors:  G Chakshusmathi; G S Ratnaparkhi; P K Madhu; R Varadarajan
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

2.  A thermodynamic molecular switch in biological systems: ribonuclease S' fragment complementation reactions.

Authors:  P W Chun
Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

3.  Comparison of binding energies of SrcSH2-phosphotyrosyl peptides with structure-based prediction using surface area based empirical parameterization.

Authors:  D A Henriques; J E Ladbury; R M Jackson
Journal:  Protein Sci       Date:  2000-10       Impact factor: 6.725

4.  Heat capacity changes and hydrophobic interactions in the binding of FK506 and rapamycin to the FK506 binding protein.

Authors:  P R Connelly; J A Thomson
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-01       Impact factor: 11.205

5.  Elicitation of structure-specific antibodies by epitope scaffolds.

Authors:  Gilad Ofek; F Javier Guenaga; William R Schief; Jeff Skinner; David Baker; Richard Wyatt; Peter D Kwong
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

6.  Measurement of the binding of tyrosyl phosphopeptides to SH2 domains: a reappraisal.

Authors:  J E Ladbury; M A Lemmon; M Zhou; J Green; M C Botfield; J Schlessinger
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-11       Impact factor: 11.205

7.  Dynamics of ribonuclease A and ribonuclease S: computational and experimental studies.

Authors:  G Nadig; G S Ratnaparkhi; R Varadarajan; S Vishveshwara
Journal:  Protein Sci       Date:  1996-10       Impact factor: 6.725

Review 8.  Entropy-enthalpy compensation: role and ramifications in biomolecular ligand recognition and design.

Authors:  John D Chodera; David L Mobley
Journal:  Annu Rev Biophys       Date:  2013       Impact factor: 12.981

9.  The structures of RNase A complexed with 3'-CMP and d(CpA): active site conformation and conserved water molecules.

Authors:  I Zegers; D Maes; M H Dao-Thi; F Poortmans; R Palmer; L Wyns
Journal:  Protein Sci       Date:  1994-12       Impact factor: 6.725

10.  Ca2+-induced linker transformation leads to a compact and rigid collagen-binding domain of Clostridium histolyticum collagenase.

Authors:  Sagaya T L Philominathan; Osamu Matsushita; Robert Gensure; Joshua Sakon
Journal:  FEBS J       Date:  2009-05-28       Impact factor: 5.542

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