Literature DB >> 10592272

dbSNP: a database of single nucleotide polymorphisms.

E M Smigielski1, K Sirotkin, M Ward, S T Sherry.   

Abstract

In response to a need for a general catalog of genome variation to address the large-scale sampling designs required by association studies, gene mapping and evolutionary biology, the National Cancer for Biotechnology Information (NCBI) has established the dbSNP database. Submissions to dbSNP will be integrated with other sources of information at NCBI such as GenBank, PubMed, LocusLink and the Human Genome Project data. The complete contents of dbSNP are available to the public at website: http://www.ncbi.nlm.nih.gov/SNP. Submitted SNPs can also be downloaded via anonymous FTP at ftp://ncbi.nlm.nih.gov/snp/

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Year:  2000        PMID: 10592272      PMCID: PMC102496          DOI: 10.1093/nar/28.1.352

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  7 in total

Review 1.  dbSNP-database for single nucleotide polymorphisms and other classes of minor genetic variation.

Authors:  S T Sherry; M Ward; K Sirotkin
Journal:  Genome Res       Date:  1999-08       Impact factor: 9.043

2.  Prospects for whole-genome linkage disequilibrium mapping of common disease genes.

Authors:  L Kruglyak
Journal:  Nat Genet       Date:  1999-06       Impact factor: 38.330

3.  Shattuck lecture--medical and societal consequences of the Human Genome Project.

Authors:  F S Collins
Journal:  N Engl J Med       Date:  1999-07-01       Impact factor: 91.245

4.  As consortium plans free SNP map of human genome.

Authors:  E Masood
Journal:  Nature       Date:  1999-04-15       Impact factor: 49.962

5.  Reliable identification of large numbers of candidate SNPs from public EST data.

Authors:  K H Buetow; M N Edmonson; A B Cassidy
Journal:  Nat Genet       Date:  1999-03       Impact factor: 38.330

6.  High throughput analysis of differential gene expression.

Authors:  John P Carulli; Michael Artinger; Pamela M Swain; Colleen D Root; Linda Chee; Craig Tulig; Jennifer Guerin; Mark Osborne; Gary Stein; Jane Lian; Peter T Lomedico
Journal:  J Cell Biochem       Date:  1998       Impact factor: 4.429

Review 7.  The DNA revolution in population genetics.

Authors:  L L Cavalli-Sforza
Journal:  Trends Genet       Date:  1998-02       Impact factor: 11.639

  7 in total
  184 in total

1.  NCBI's LocusLink and RefSeq.

Authors:  D R Maglott; K S Katz; H Sicotte; K D Pruitt
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Robust and accurate single nucleotide polymorphism genotyping by dynamic allele-specific hybridization (DASH): design criteria and assay validation.

Authors:  J A Prince; L Feuk; W M Howell; M Jobs; T Emahazion; K Blennow; A J Brookes
Journal:  Genome Res       Date:  2001-01       Impact factor: 9.043

3.  ALFRED: an allele frequency database for diverse populations and DNA polymorphisms--an update.

Authors:  M V Osier; K H Cheung; J R Kidd; A J Pakstis; P L Miller; K K Kidd
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

4.  rSNP_Guide, a database system for analysis of transcription factor binding to target sequences: application to SNPs and site-directed mutations.

Authors:  J V Ponomarenko; T I Merkulova; G V Vasiliev; Z B Levashova; G V Orlova; S V Lavryushev; O N Fokin; M P Ponomarenko; A S Frolov; A Sarai
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

5.  Multiplexed SNP genotyping using the Qbead system: a quantum dot-encoded microsphere-based assay.

Authors:  Hongxia Xu; Michael Y Sha; Edith Y Wong; Janet Uphoff; Yanzhang Xu; Joseph A Treadway; Anh Truong; Eamonn O'Brien; Steven Asquith; Michael Stubbins; Nigel K Spurr; Eric H Lai; Walt Mahoney
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

6.  SNP genotyping on a genome-wide amplified DOP-PCR template.

Authors:  Struan F A Grant; Simone Steinlicht; Ulrike Nentwich; Rainer Kern; Barbara Burwinkel; Ralf Tolle
Journal:  Nucleic Acids Res       Date:  2002-11-15       Impact factor: 16.971

7.  High-throughput genotyping of advanced congenic lines by high resolution melting analysis for identification of Bbaa2, a QTL controlling Lyme arthritis.

Authors:  Kenneth K C Bramwell; Ying Ma; John H Weis; Cory Teuscher; Janis J Weis
Journal:  Biotechniques       Date:  2012-03       Impact factor: 1.993

8.  EnsMart: a generic system for fast and flexible access to biological data.

Authors:  Arek Kasprzyk; Damian Keefe; Damian Smedley; Darin London; William Spooner; Craig Melsopp; Martin Hammond; Philippe Rocca-Serra; Tony Cox; Ewan Birney
Journal:  Genome Res       Date:  2004-01       Impact factor: 9.043

9.  rSNP_Guide, a database system for analysis of transcription factor binding to DNA with variations: application to genome annotation.

Authors:  Julia V Ponomarenko; Tatyana I Merkulova; Galina V Orlova; Oleg N Fokin; Elena V Gorshkova; Anatoly S Frolov; Vadim P Valuev; Mikhail P Ponomarenko
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

10.  HLA-B*5801 allele as a genetic marker for severe cutaneous adverse reactions caused by allopurinol.

Authors:  Shuen-Iu Hung; Wen-Hung Chung; Lieh-Bang Liou; Chen-Chung Chu; Marie Lin; Hsien-Ping Huang; Yen-Ling Lin; Joung-Liang Lan; Li-Cheng Yang; Hong-Shang Hong; Ming-Jing Chen; Ping-Chin Lai; Mai-Szu Wu; Chia-Yu Chu; Kuo-Hsien Wang; Chien-Hsiun Chen; Cathy S J Fann; Jer-Yuarn Wu; Yuan-Tsong Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-02       Impact factor: 11.205

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