Literature DB >> 10575232

Complete homology maps of the rabbit (Oryctolagus cuniculus) and human by reciprocal chromosome painting.

R Korstanje1, P C O'Brien, F Yang, W Rens, A A Bosma, H A van Lith, L F van Zutphen, M A Ferguson-Smith.   

Abstract

Fluorescence in situ hybridization (FISH) was used to construct a homology map to analyse the extent of evolutionary conservation of chromosome segments between human and rabbit (Oryctolagus cuniculus, 2n = 44). Chromosome-specific probes were established by bivariate fluorescence activated flow sorting followed by degenerate oligonucleotide-primed PCR (DOP-PCR). Painting of rabbit probes to human chromosomes and vice versa allowed a detailed analysis of the homology between these species. All rabbit chromosome paints, except for the Y paint, hybridized to human chromosomes. All human chromosome paints, except for the Y paint, hybridized to rabbit chromosomes. The results obtained revealed extensive genome conservation between the two species. Rabbit chromosomes 12, 19 and X were found to be completely homologous to human chromosomes 6, 17 and X, respectively. All other human chromosomes were homologous to two or sometimes three rabbit chromosomes. Many conserved chromosome segments found previously in other mammals (e.g. cat, pig, cattle, Indian muntjac) were also found to be conserved in rabbit chromosomes.

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Year:  1999        PMID: 10575232     DOI: 10.1159/000015325

Source DB:  PubMed          Journal:  Cytogenet Cell Genet        ISSN: 0301-0171


  24 in total

Review 1.  High-speed chromosome sorting.

Authors:  Sherrif F Ibrahim; Ger van den Engh
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

2.  A comparative ZOO-FISH analysis in bats elucidates the phylogenetic relationships between Megachiroptera and five microchiropteran families.

Authors:  M Volleth; K G Heller; R A Pfeiffer; H Hameister
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

3.  A high-resolution physical map of equine homologs of HSA19 shows divergent evolution compared with other mammals.

Authors:  Candice Brinkmeyer-Langford; Terje Raudsepp; Eun-Joon Lee; Glenda Goh; Alejandro A Schäffer; Richa Agarwala; Michelle L Wagner; Teruaki Tozaki; Loren C Skow; James E Womack; James R Mickelson; Bhanu P Chowdhary
Journal:  Mamm Genome       Date:  2005-09-14       Impact factor: 2.957

4.  Endothelial lipase mediates HDL levels in normal and hyperlipidemic rabbits.

Authors:  Jifeng Zhang; Ying Yu; Kae Nakamura; Tomonari Koike; Ahmed Bilal Waqar; Xiaowei Zhang; Enqi Liu; Kazutoshi Nishijima; Shuji Kitajima; Masashi Shiomi; Zhongxia Qi; Jingwei Yu; Mark J Graham; Rosanne M Crooke; Tatsuro Ishida; Ken-Ichi Hirata; Eva Hurt-Camejo; Y Eugene Chen; Jianglin Fan
Journal:  J Atheroscler Thromb       Date:  2012-01-12       Impact factor: 4.928

5.  Reconstruction of karyotype evolution in core Glires. I. The genome homology revealed by comparative chromosome painting.

Authors:  Violetta R Beklemisheva; Svetlana A Romanenko; Larisa S Biltueva; Vladimir A Trifonov; Nadezhda V Vorobieva; Natalya A Serdukova; Nadezhda V Rubtsova; Oleg V Brandler; Patricia C M O'Brien; Fentang Yang; Roscoe Stanyon; Malcolm A Ferguson-Smith; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2011-05-11       Impact factor: 5.239

6.  Construction of a cytogenetically anchored microsatellite map in rabbit.

Authors:  Céline Chantry-Darmon; Céline Urien; Hélène Hayes; Maud Bertaud; Sead Chadi-Taourit; Patrick Chardon; Daniel Vaiman; Claire Rogel-Gaillard
Journal:  Mamm Genome       Date:  2005-06       Impact factor: 2.957

7.  The origin of human chromosome 1 and its homologs in placental mammals.

Authors:  William J Murphy; Lutz Frönicke; Stephen J O'Brien; Roscoe Stanyon
Journal:  Genome Res       Date:  2003-07-17       Impact factor: 9.043

8.  Towards the delineation of the ancestral eutherian genome organization: comparative genome maps of human and the African elephant (Loxodonta africana) generated by chromosome painting.

Authors:  Lutz Frönicke; Johannes Wienberg; Gary Stone; Lisa Adams; Roscoe Stanyon
Journal:  Proc Biol Sci       Date:  2003-07-07       Impact factor: 5.349

9.  Accuracy and coverage assessment of Oryctolagus cuniculus (rabbit) genes encoding immunoglobulins in the whole genome sequence assembly (OryCun2.0) and localization of the IGH locus to chromosome 20.

Authors:  E Michael Gertz; Alejandro A Schäffer; Richa Agarwala; Amélie Bonnet-Garnier; Claire Rogel-Gaillard; Hélène Hayes; Rose G Mage
Journal:  Immunogenetics       Date:  2013-08-08       Impact factor: 2.846

10.  Cross-species chromosome painting in the golden mole and elephant-shrew: support for the mammalian clades Afrotheria and Afroinsectiphillia but not Afroinsectivora.

Authors:  T J Robinson; B Fu; M A Ferguson-Smith; F Yang
Journal:  Proc Biol Sci       Date:  2004-07-22       Impact factor: 5.349

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