Literature DB >> 10517322

Cis requirements for transposition of Tc1-like transposons in C. elegans.

S E Fischer1, H G van Luenen, R H Plasterk.   

Abstract

The Caenorhabditis elegans transposons Tc1 and Tc3 are able to transpose in heterologous systems such as human cell lines and zebrafish. Because these transposons might be useful vectors for transgenesis and mutagenesis of diverse species, we determined the minimal cis requirements for transposition. Deletion mapping of the transposon ends shows that fewer than 100 bp are sufficient for transposition of Tc3. Unlike Tc1, Tc3 has a second, internal transposase binding site at each transposon end. We found that these binding sites play no major role in the transposition reaction, since they can be deleted without reduction of the transposition frequency. Site-directed mutagenesis was performed on the conserved terminal base pairs at the Tc3 ends. The four terminal base pairs at the ends of the Tc3 inverted repeats were shown to be required for efficient transposition. Finally, increasing the length of the transposon from 1.9 kb to 12.5 kb reduced the transposition frequency by 20-fold, both in vivo and in vitro.

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Year:  1999        PMID: 10517322     DOI: 10.1007/pl00008641

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  22 in total

1.  Tc8, a Tourist-like transposon in Caenorhabditis elegans.

Authors:  Q H Le; K Turcotte; T Bureau
Journal:  Genetics       Date:  2001-07       Impact factor: 4.562

2.  Structural analysis of the bipartite DNA-binding domain of Tc3 transposase bound to transposon DNA.

Authors:  Stephan Watkins; Gertie van Pouderoyen; Titia K Sixma
Journal:  Nucleic Acids Res       Date:  2004-08-10       Impact factor: 16.971

3.  Enhancement of Sleeping Beauty transposition by CpG methylation: possible role of heterochromatin formation.

Authors:  Kosuke Yusa; Junji Takeda; Kyoji Horie
Journal:  Mol Cell Biol       Date:  2004-05       Impact factor: 4.272

4.  The role of vertical and horizontal transfer in the evolution of Paris-like elements in drosophilid species.

Authors:  Gabriel Luz Wallau; Valéria Lima Kaminski; Elgion L S Loreto
Journal:  Genetica       Date:  2012-04-24       Impact factor: 1.082

5.  Conserved motifs and dynamic aspects of the terminal inverted repeat organization within Bari-like transposons.

Authors:  Roberta Moschetti; Sarantis Chlamydas; Renè Massimiliano Marsano; Ruggiero Caizzi
Journal:  Mol Genet Genomics       Date:  2008-05       Impact factor: 3.291

Review 6.  Transposon tools hopping in vertebrates.

Authors:  Jun Ni; Karl J Clark; Scott C Fahrenkrug; Stephen C Ekker
Journal:  Brief Funct Genomic Proteomic       Date:  2008-11

7.  Regulated transposition of a fish transposon in the mouse germ line.

Authors:  S E Fischer; E Wienholds; R H Plasterk
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-29       Impact factor: 11.205

8.  Transposon diversity in Arabidopsis thaliana.

Authors:  Q H Le; S Wright; Z Yu; T Bureau
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

Review 9.  A transposon toolkit for gene transfer and mutagenesis in protozoan parasites.

Authors:  Jeziel D Damasceno; Stephen M Beverley; Luiz R O Tosi
Journal:  Genetica       Date:  2009-09-10       Impact factor: 1.082

10.  Three enhancements to the inference of statistical protein-DNA potentials.

Authors:  Mohammed AlQuraishi; Harley H McAdams
Journal:  Proteins       Date:  2012-11-12
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