Literature DB >> 10498936

Locus control regions: coming of age at a decade plus.

Q Li1, S Harju, K R Peterson.   

Abstract

The beta-globin locus control region (LCR) is the founding member of a novel class of cis-acting regulatory elements that confer high level, tissue-specific, site-of-integration-independent, copy number-dependent expression on linked transgenes located in ectopic chromatin sites. Knowledge from beta-globin and other LCR studies has shed light on our understanding of the long-range interaction between enhancers and promoters, the relationship between chromatin conformation and transcriptional regulation, and the developmental regulation of multiple gene loci. After over a decade of investigation and discovery, we take a retrospective look at the beta-globin LCR and other LCRs, summarize their properties and review models of LCR function.

Mesh:

Year:  1999        PMID: 10498936     DOI: 10.1016/s0168-9525(99)01780-1

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  69 in total

1.  Developmentally dynamic histone acetylation pattern of a tissue-specific chromatin domain.

Authors:  E C Forsberg; K M Downs; H M Christensen; H Im; P A Nuzzi; E H Bresnick
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

2.  Patterns of histone acetylation suggest dual pathways for gene activation by a bifunctional locus control region.

Authors:  F Elefant; Y Su; S A Liebhaber; N E Cooke
Journal:  EMBO J       Date:  2000-12-15       Impact factor: 11.598

Review 3.  Locus control regions.

Authors:  Qiliang Li; Kenneth R Peterson; Xiangdong Fang; George Stamatoyannopoulos
Journal:  Blood       Date:  2002-11-01       Impact factor: 22.113

4.  Specification of unique Pit-1 activity in the hGH locus control region.

Authors:  Brian M Shewchuk; Stephen A Liebhaber; Nancy E Cooke
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-20       Impact factor: 11.205

5.  Chromosomal elements regulate gene activity and chromatin structure of the human serpin gene cluster at 14q32.1.

Authors:  Mark D Marsden; R E K Fournier
Journal:  Mol Cell Biol       Date:  2003-05       Impact factor: 4.272

6.  The ERV-9 LTR enhancer is not blocked by the HS5 insulator and synthesizes through the HS5 site non-coding, long RNAs that regulate LTR enhancer function.

Authors:  Jianhua Ling; Wenhu Pi; Xiuping Yu; Chikh Bengra; Qiaoming Long; Huaqian Jin; Andreas Seyfang; Dorothy Tuan
Journal:  Nucleic Acids Res       Date:  2003-08-01       Impact factor: 16.971

7.  A human globin enhancer causes both discrete and widespread alterations in chromatin structure.

Authors:  AeRi Kim; Ann Dean
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

8.  Genome architecture of the human beta-globin locus affects developmental regulation of gene expression.

Authors:  Susanna Harju; Patrick A Navas; George Stamatoyannopoulos; Kenneth R Peterson
Journal:  Mol Cell Biol       Date:  2005-10       Impact factor: 4.272

Review 9.  Transcriptional regulation of neuronal phenotype in mammals.

Authors:  Qiufu Ma
Journal:  J Physiol       Date:  2006-07-06       Impact factor: 5.182

10.  Quantification of DNaseI-sensitivity by real-time PCR: quantitative analysis of DNaseI-hypersensitivity of the mouse beta-globin LCR.

Authors:  M McArthur; S Gerum; G Stamatoyannopoulos
Journal:  J Mol Biol       Date:  2001-10-12       Impact factor: 5.469

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