Literature DB >> 12724410

Chromosomal elements regulate gene activity and chromatin structure of the human serpin gene cluster at 14q32.1.

Mark D Marsden1, R E K Fournier.   

Abstract

The human serine protease inhibitor (serpin) gene cluster at 14q32.1 contains a number of genes that are specifically expressed in hepatic cells. Cell-specific enhancers have been identified in several of these genes, but elements involved in locus-wide gene and chromatin control have yet to be defined. To identify regulatory elements in this region, we prepared a series of mutant chromosomal alleles by homologous recombination and transferred the specifically modified human chromosomes to hepatic cells for functional tests. We report that deletion of an 8-kb DNA segment upstream of the human alpha1-antitrypsin gene yields a mutant serpin allele that fails to be activated in hepatic cells. Within this region, a 2.3-kb DNA segment between kb -8.1 and -5.8 contains a previously unrecognized control region that is required not only for serpin gene activation but also for chromatin remodeling of the entire locus.

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Year:  2003        PMID: 12724410      PMCID: PMC164764          DOI: 10.1128/MCB.23.10.3516-3526.2003

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  49 in total

1.  Tissue-specific regulation of human alpha 1-antitrypsin gene expression in transgenic mice.

Authors:  R F Shen; S M Clift; J L DeMayo; R N Sifers; M J Finegold; S L Woo
Journal:  DNA       Date:  1989-03

2.  p1B15: a cDNA clone of the rat mRNA encoding cyclophilin.

Authors:  P E Danielson; S Forss-Petter; M A Brow; L Calavetta; J Douglass; R J Milner; J G Sutcliffe
Journal:  DNA       Date:  1988-05

3.  Partial activation of gene activity and chromatin remodeling of the human 14q32.1 serpin gene cluster by HNF-1 alpha and HNF-4 in fibroblast microcell hybrids.

Authors:  P Rollini; L Xu; R E Fournier
Journal:  Somat Cell Mol Genet       Date:  1999-07

4.  Neonatal hepatitis induced by alpha 1-antitrypsin: a transgenic mouse model.

Authors:  M J Dycaico; S G Grant; K Felts; W S Nichols; S A Geller; J H Hager; A J Pollard; S W Kohler; H P Short; F R Jirik
Journal:  Science       Date:  1988-12-09       Impact factor: 47.728

5.  Species- and tissue-specific expression of human alpha 1-antitrypsin in transgenic mice.

Authors:  G D Kelsey; S Povey; A E Bygrave; R H Lovell-Badge
Journal:  Genes Dev       Date:  1987-04       Impact factor: 11.361

6.  The human alpha-1-antitrypsin gene is efficiently expressed from two tissue-specific promotors in transgenic mice.

Authors:  U Rüther; M Tripodi; R Cortese; E F Wagner
Journal:  Nucleic Acids Res       Date:  1987-09-25       Impact factor: 16.971

7.  Cis- and trans-acting elements responsible for the cell-specific expression of the human alpha 1-antitrypsin gene.

Authors:  V De Simone; G Ciliberto; E Hardon; G Paonessa; F Palla; L Lundberg; R Cortese
Journal:  EMBO J       Date:  1987-09       Impact factor: 11.598

8.  Two distinct factors interact with the promoter regions of several liver-specific genes.

Authors:  E M Hardon; M Frain; G Paonessa; R Cortese
Journal:  EMBO J       Date:  1988-06       Impact factor: 11.598

9.  Two different liver-specific factors stimulate in vitro transcription from the human alpha 1-antitrypsin promoter.

Authors:  P Monaci; A Nicosia; R Cortese
Journal:  EMBO J       Date:  1988-07       Impact factor: 11.598

10.  The human alpha 1-antitrypsin gene is transcribed from two different promoters in macrophages and hepatocytes.

Authors:  E Perlino; R Cortese; G Ciliberto
Journal:  EMBO J       Date:  1987-09       Impact factor: 11.598

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  6 in total

1.  Sequence organization and matrix attachment regions of the human serine protease inhibitor gene cluster at 14q32.1.

Authors:  Stephanie J Namciu; Richard D Friedman; Mark D Marsden; Lourdes M Sarausad; Christine L Jasoni; R E K Fournier
Journal:  Mamm Genome       Date:  2004-03       Impact factor: 2.957

2.  Identification of coexpressed gene clusters in a comparative analysis of transcriptome and proteome in mouse tissues.

Authors:  T Mijalski; A Harder; T Halder; M Kersten; M Horsch; T M Strom; H V Liebscher; F Lottspeich; M Hrabe de Angelis; J Beckers
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-06       Impact factor: 11.205

3.  Targeted deletion of multiple CTCF-binding elements in the human C-MYC gene reveals a requirement for CTCF in C-MYC expression.

Authors:  Wendy M Gombert; Anton Krumm
Journal:  PLoS One       Date:  2009-07-01       Impact factor: 3.240

4.  The locus control region activates serpin gene expression through recruitment of liver-specific transcription factors and RNA polymerase II.

Authors:  Hui Zhao; Richard D Friedman; R E K Fournier
Journal:  Mol Cell Biol       Date:  2007-05-25       Impact factor: 4.272

5.  Formation of a large, complex domain of histone hyperacetylation at human 14q32.1 requires the serpin locus control region.

Authors:  Euan W Baxter; W Jason Cummings; R E K Fournier
Journal:  Nucleic Acids Res       Date:  2005-06-07       Impact factor: 16.971

6.  Determinants of transcription factor regulatory range.

Authors:  Chen-Hao Chen; Rongbin Zheng; Collin Tokheim; Xin Dong; Jingyu Fan; Changxin Wan; Qin Tang; Myles Brown; Jun S Liu; Clifford A Meyer; X Shirley Liu
Journal:  Nat Commun       Date:  2020-05-18       Impact factor: 14.919

  6 in total

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