Literature DB >> 10487861

Complete genomes in WWW Entrez: data representation and analysis.

T A Tatusova1, I Karsch-Mizrachi, J A Ostell.   

Abstract

MOTIVATION: The large amount of genome sequence data now publicly available can be accessed through the National Center for Biotechnology Information (NCBI) Entrez search and retrieval system, making it possible to explore data of a breadth and scope exceeding traditional flatfile views.
RESULTS: Here we report recent improvements for completely sequenced genomes from viruses, bacteria, and yeast. Flexible web based views, precomputed relationships, and immediate access to analytical tools provide scientists with a portal into the new insights to be gained from completed genome sequences. AVAILABILITY: Entrez Genomes can be accessed on the World Wide Web at http://www.ncbi.nlm.nih.gov/Entrez/Genome/ org.html.

Entities:  

Mesh:

Substances:

Year:  1999        PMID: 10487861     DOI: 10.1093/bioinformatics/15.7.536

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  50 in total

1.  Links from genome proteins to known 3-D structures.

Authors:  Y Wang; S Bryant; R Tatusov; T Tatusova
Journal:  Genome Res       Date:  2000-10       Impact factor: 9.043

2.  A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis.

Authors:  Kira S Makarova; L Aravind; Nick V Grishin; Igor B Rogozin; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

3.  Connected gene neighborhoods in prokaryotic genomes.

Authors:  Igor B Rogozin; Kira S Makarova; Janos Murvai; Eva Czabarka; Yuri I Wolf; Roman L Tatusov; Laszlo A Szekely; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2002-05-15       Impact factor: 16.971

4.  NCBI Reference Sequence project: update and current status.

Authors:  Kim D Pruitt; Tatiana Tatusova; Donna R Maglott
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

5.  Congruent evolution of different classes of non-coding DNA in prokaryotic genomes.

Authors:  Igor B Rogozin; Kira S Makarova; Darren A Natale; Alexey N Spiridonov; Roman L Tatusov; Yuri I Wolf; Jodie Yin; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

6.  National center for biotechnology information viral genomes project.

Authors:  Yiming Bao; Scott Federhen; Detlef Leipe; Vyvy Pham; Sergei Resenchuk; Mikhail Rozanov; Roman Tatusov; Tatiana Tatusova
Journal:  J Virol       Date:  2004-07       Impact factor: 5.103

7.  Database resources of the National Center for Biotechnology Information.

Authors:  D L Wheeler; C Chappey; A E Lash; D D Leipe; T L Madden; G D Schuler; T A Tatusova; B A Rapp
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

8.  Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7.

Authors:  Lukas M Wick; Weihong Qi; David W Lacher; Thomas S Whittam
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

9.  Database resources of the National Center for Biotechnology Information: 2002 update.

Authors:  David L Wheeler; Deanna M Church; Alex E Lash; Detlef D Leipe; Thomas L Madden; Joan U Pontius; Gregory D Schuler; Lynn M Schriml; Tatiana A Tatusova; Lukas Wagner; Barbara A Rapp
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

10.  Explorative search of distributed bio-data to answer complex biomedical questions.

Authors:  Marco Masseroli; Matteo Picozzi; Giorgio Ghisalberti; Stefano Ceri
Journal:  BMC Bioinformatics       Date:  2014-01-10       Impact factor: 3.169

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.