Literature DB >> 10473384

Distribution and diversity of sulfur-oxidizing Thiomicrospira spp. at a shallow-water hydrothermal vent in the Aegean Sea (Milos, Greece).

T Brinkhoff1, S M Sievert, J Kuever, G Muyzer.   

Abstract

A shallow-water hydrothermal vent system in the Aegean Sea close to the island of Milos (Greece) was chosen to study the diversity and distribution of the chemolithoautotrophic sulfur-oxidizing bacterium Thiomicrospira. Cell numbers in samples from different regions around a solitary vent decreased toward the center of the vent (horizontal distribution), as well as with depth (vertical distribution), corresponding to an increase in temperature (from ca. 25 to 60 degrees C) and a decrease in pH (from ca. pH 7 to 5). Thiomicrospira was one of the most abundant culturable sulfur oxidizers and was even dominant in one region. Phylogenetic analysis of Thiomicrospira spp. present in the highest most-probable-number (MPN) dilutions revealed that most of the obtained sequences grouped in two new closely related clusters within the Thiomicrospira branch. Two different new isolates, i.e., Milos-T1 and Milos-T2, were obtained from high-dilution (10(-5)) enrichments. Phylogenetic analysis indicated that isolate Milos-T1 is related to the recently described Thiomicrospira kuenenii and Hydrogenovibrio marinus, whereas isolate Milos-T2 grouped with the MPN sequences of cluster 2. The predominance of strain Milos-T2 was indicated by its identification in several environmental samples by hybridization analysis of denaturing gradient gel electrophoresis (DGGE) patterns and by sequencing of one of the corresponding bands, i.e., ML-1, from the DGGE gel. The results shown in this paper support earlier indications that Thiomicrospira species are important members of hydrothermal vent communities.

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Year:  1999        PMID: 10473384      PMCID: PMC99709     

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  15 in total

1.  Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece).

Authors:  S M Sievert; T Brinkhoff; G Muyzer; W Ziebis; J Kuever
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

2.  'Touchdown' PCR to circumvent spurious priming during gene amplification.

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Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

3.  GenBank.

Authors:  D A Benson; M S Boguski; D J Lipman; J Ostell
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

4.  The RDP (Ribosomal Database Project).

Authors:  B L Maidak; G J Olsen; N Larsen; R Overbeek; M J McCaughey; C R Woese
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

5.  Thiomicrospira pelophila, gen. n., sp. n., a new obligately chemolithotrophic colourless sulfur bacterium.

Authors:  J G Kuenen; H Veldkamp
Journal:  Antonie Van Leeuwenhoek       Date:  1972       Impact factor: 2.271

6.  Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments.

Authors:  G Muyzer; A Teske; C O Wirsen; H W Jannasch
Journal:  Arch Microbiol       Date:  1995-09       Impact factor: 2.552

7.  Thiomicrospira chilensis sp. nov., a mesophilic obligately chemolithoautotrophic sulfuroxidizing bacterium isolated from a Thioploca mat.

Authors:  T Brinkhoff; G Muyzer; C O Wirsen; J Kuever
Journal:  Int J Syst Bacteriol       Date:  1999-04

8.  Thiomicrospira kuenenii sp. nov. and Thiomicrospira frisia sp. nov., two mesophilic obligately chemolithoautotrophic sulfur-oxidizing bacteria isolated from an intertidal mud flat.

Authors:  T Brinkhoff; G Muyzer; C O Wirsen; J Kuever
Journal:  Int J Syst Bacteriol       Date:  1999-04

9.  Comparison of a new thiomicrospira strain from the mid-atlantic ridge with known hydrothermal vent isolates

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-10       Impact factor: 4.792

10.  Geomicrobiology of deep-sea hydrothermal vents.

Authors:  H W Jannasch; M J Mottl
Journal:  Science       Date:  1985-08-23       Impact factor: 47.728

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  23 in total

1.  Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece).

Authors:  S M Sievert; T Brinkhoff; G Muyzer; W Ziebis; J Kuever
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

2.  Identification of 16S ribosomal DNA-defined bacterial populations at a shallow submarine hydrothermal vent near Milos Island (Greece).

Authors:  S M Sievert; J Kuever; G Muyzer
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

3.  Bacterial community composition in different sediments from the Eastern Mediterranean Sea: a comparison of four 16S ribosomal DNA clone libraries.

Authors:  Paraskevi N Polymenakou; Stefan Bertilsson; Anastasios Tselepides; Euripides G Stephanou
Journal:  Microb Ecol       Date:  2005-11-23       Impact factor: 4.552

4.  Isolation, characterization, and ecology of cold-active, chemolithotrophic, sulfur-oxidizing bacteria from perennially ice-covered Lake Fryxell, Antarctica.

Authors:  W Matthew Sattley; Michael T Madigan
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

5.  Composition and variation of sediment bacterial and nirS-harboring bacterial communities at representative sites of the Bohai Gulf coastal zone, China.

Authors:  Xiangyu Guan; Lingling Zhu; Youxun Li; Yuxuan Xie; Mingzhang Zhao; Ximing Luo
Journal:  World J Microbiol Biotechnol       Date:  2013-11-09       Impact factor: 3.312

6.  Phylogenetic composition of bacterioplankton assemblages from the Arctic Ocean.

Authors:  Nasreen Bano; James T Hollibaugh
Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

7.  Links between geographic location, environmental factors, and microbial community composition in sediments of the Eastern Mediterranean Sea.

Authors:  P N Polymenakou; S Bertilsson; A Tselepides; E G Stephanou
Journal:  Microb Ecol       Date:  2005-07-07       Impact factor: 4.552

8.  Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan.

Authors:  Hisako Hirayama; Michinari Sunamura; Ken Takai; Takuro Nunoura; Takuro Noguchi; Hanako Oida; Yasuo Furushima; Hiroyuki Yamamoto; Tamotsu Oomori; Koki Horikoshi
Journal:  Appl Environ Microbiol       Date:  2007-10-05       Impact factor: 4.792

9.  Diversity in CO2-Concentrating Mechanisms among Chemolithoautotrophs from the Genera Hydrogenovibrio, Thiomicrorhabdus, and Thiomicrospira, Ubiquitous in Sulfidic Habitats Worldwide.

Authors:  Kathleen M Scott; Juliana M Leonard; Rich Boden; Dale Chaput; Clare Dennison; Edward Haller; Tara L Harmer; Abigail Anderson; Tiffany Arnold; Samantha Budenstein; Rikki Brown; Juan Brand; Jacob Byers; Jeanette Calarco; Timothy Campbell; Erica Carter; Max Chase; Montana Cole; Deandra Dwyer; Jonathon Grasham; Christopher Hanni; Ashlee Hazle; Cody Johnson; Ryan Johnson; Brandi Kirby; Katherine Lewis; Brianna Neumann; Tracy Nguyen; Jonathon Nino Charari; Ooreoluwa Morakinyo; Bengt Olsson; Shanetta Roundtree; Emily Skjerve; Ashley Ubaldini; Robert Whittaker
Journal:  Appl Environ Microbiol       Date:  2019-01-23       Impact factor: 4.792

10.  Two bacteria phylotypes are predominant in the Suiyo seamount hydrothermal plume.

Authors:  Michinari Sunamura; Yowsuke Higashi; Chiwaka Miyako; Jun-ichiro Ishibashi; Akihiko Maruyama
Journal:  Appl Environ Microbiol       Date:  2004-02       Impact factor: 4.792

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