Literature DB >> 10438844

Sequence requirements for the assembly of simian virus 40 T antigen and the T-antigen origin binding domain on the viral core origin of replication.

H Y Kim1, B A Barbaro, W S Joo, A E Prack, K R Sreekumar, P A Bullock.   

Abstract

The regions of the simian virus 40 (SV40) core origin that are required for stable assembly of virally encoded T antigen (T-ag) and the T-ag origin binding domain (T-ag-obd(131-260)) have been determined. Binding of the purified T-ag-obd(131-260) is mediated by interactions with the central region of the core origin, site II. In contrast, T-ag binding and hexamer assembly requires a larger region of the core origin that includes both site II and an additional fragment of DNA that may be positioned on either side of site II. These studies indicate that in the context of T-ag, the origin binding domain can engage the pentanucleotides in site II only if a second region of T-ag interacts with one of the flanking sequences. The requirements for T-ag double-hexamer assembly are complex; the nucleotide cofactor present in the reaction modulates the sequence requirements for oligomerization. Nevertheless, these experiments provide additional evidence that only a subset of the SV40 core origin is required for assembly of T-ag double hexamers.

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Year:  1999        PMID: 10438844      PMCID: PMC104281     

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  83 in total

1.  The binding site on SV40 DNA for a T antigen-related protein.

Authors:  R Tjian
Journal:  Cell       Date:  1978-01       Impact factor: 41.582

2.  Binding studies of SV40 T-antigen to SV40 binding site II.

Authors:  P Gottlieb; M S Nasoff; E F Fisher; A M Walsh; M H Caruthers
Journal:  Nucleic Acids Res       Date:  1985-09-25       Impact factor: 16.971

3.  An immunoaffinity purification procedure for SV40 large T antigen.

Authors:  V Simanis; D P Lane
Journal:  Virology       Date:  1985-07-15       Impact factor: 3.616

4.  Cold-sensitive regulatory mutants of simian virus 40.

Authors:  D DiMaio; D Nathans
Journal:  J Mol Biol       Date:  1980-06-15       Impact factor: 5.469

5.  recA protein-catalyzed strand assimilation: stimulation by Escherichia coli single-stranded DNA-binding protein.

Authors:  K McEntee; G M Weinstock; I R Lehman
Journal:  Proc Natl Acad Sci U S A       Date:  1980-02       Impact factor: 11.205

6.  A poly(dT)-stimulated ATPase activity associated with simian virus 40 large T antigen.

Authors:  D Giacherio; L P Hager
Journal:  J Biol Chem       Date:  1979-09-10       Impact factor: 5.157

7.  Topography of simian virus 40 A protein-DNA complexes: arrangement of pentanucleotide interaction sites at the origin of replication.

Authors:  A L DeLucia; B A Lewton; R Tjian; P Tegtmeyer
Journal:  J Virol       Date:  1983-04       Impact factor: 5.103

8.  Construction and analysis of simian virus 40 origins defective in tumor antigen binding and DNA replication.

Authors:  R M Myers; R Tjian
Journal:  Proc Natl Acad Sci U S A       Date:  1980-11       Impact factor: 11.205

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  In vitro replication of duplex circular DNA containing the simian virus 40 DNA origin site.

Authors:  C R Wobbe; F Dean; L Weissbach; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1985-09       Impact factor: 11.205

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  17 in total

1.  Peptides containing cyclin/Cdk-nuclear localization signal motifs derived from viral initiator proteins bind to DNA when unphosphorylated.

Authors:  Ronald J Kim; Stephanie Moine; Danielle K Reese; Peter A Bullock
Journal:  J Virol       Date:  2002-12       Impact factor: 5.103

2.  Characterization of the DNA-binding properties of the origin-binding domain of simian virus 40 large T antigen by fluorescence anisotropy.

Authors:  S Titolo; E Welchner; P W White; J Archambault
Journal:  J Virol       Date:  2003-05       Impact factor: 5.103

3.  Interactions required for binding of simian virus 40 T antigen to the viral origin and molecular modeling of initial assembly events.

Authors:  Danielle K Reese; Kodangattil R Sreekumar; Peter A Bullock
Journal:  J Virol       Date:  2004-03       Impact factor: 5.103

4.  Assembly of the replication initiation complex on SV40 origin DNA.

Authors:  Daniel T Simmons; Dahai Gai; Rebekah Parsons; Amanda Debes; Rupa Roy
Journal:  Nucleic Acids Res       Date:  2004-02-11       Impact factor: 16.971

5.  Nonspecific double-stranded DNA binding activity of simian virus 40 large T antigen is involved in melting and unwinding of the origin.

Authors:  Junfang Jiao; Daniel T Simmons
Journal:  J Virol       Date:  2003-12       Impact factor: 5.103

6.  Crystal structure of the simian virus 40 large T-antigen origin-binding domain.

Authors:  Gretchen Meinke; Peter A Bullock; Andrew Bohm
Journal:  J Virol       Date:  2006-05       Impact factor: 5.103

7.  Analyses of the interaction between the origin binding domain from simian virus 40 T antigen and single-stranded DNA provide insights into DNA unwinding and initiation of DNA replication.

Authors:  Danielle K Reese; Gretchen Meinke; Anuradha Kumar; Stephanie Moine; Kathleen Chen; James L Sudmeier; William Bachovchin; Andrew Bohm; Peter A Bullock
Journal:  J Virol       Date:  2006-09-27       Impact factor: 5.103

8.  Quantitative analysis of the binding of simian virus 40 large T antigen to DNA.

Authors:  Amélie Fradet-Turcotte; Caroline Vincent; Simon Joubert; Peter A Bullock; Jacques Archambault
Journal:  J Virol       Date:  2007-06-27       Impact factor: 5.103

9.  In the simian virus 40 in vitro replication system, start site selection by the polymerase alpha-primase complex is not significantly altered by changes in the concentration of ribonucleotides.

Authors:  John D Purviance; Andrea E Prack; Brett A Barbaro; Peter A Bullock
Journal:  J Virol       Date:  2001-07       Impact factor: 5.103

10.  Model for T-antigen-dependent melting of the simian virus 40 core origin based on studies of the interaction of the beta-hairpin with DNA.

Authors:  Anuradha Kumar; Gretchen Meinke; Danielle K Reese; Stephanie Moine; Paul J Phelan; Amélie Fradet-Turcotte; Jacques Archambault; Andrew Bohm; Peter A Bullock
Journal:  J Virol       Date:  2007-02-07       Impact factor: 5.103

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