Literature DB >> 10367457

Roughness feature of metaphase chromosome spreads and nuclei for automated cell proliferation analysis.

G Corkidi1, L Vega, J Márquez, E Rojas, P Ostrosky-Wegman.   

Abstract

As a step towards automation of mitotic index estimation for cell proliferation studies, a roughness feature of surface-intensity images is introduced: the mean depth-width ratio of extrema (MDWRE). This feature allows identification of variable-shaped metaphases and interphase nuclei in the presence of many artefacts (one metaphase per hundreds of nuclei and thousands of artefacts). The texture of the cytological objects (seen as rough surfaces) is quantified by scanning, in one dimension, the lines contained in a closed contour. MDWRE proves to be suitable for image magnifications by a factor of as low as ten, making faster scanning of slides possible. The use of this feature gives +14%, +65%, +133% and +133% better performance figures than classical textural features derived from co-occurrence matrices, such as contrast, energy, entropy and angular second moment, respectively, and +51% better than the relative extrema density (RED). The MDWRE per object and the shape of the histogram of the depth-width ratio of grey-level roughs have been shown to be very useful as textural features for the classification of metaphase images.

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Year:  1998        PMID: 10367457     DOI: 10.1007/bf02518869

Source DB:  PubMed          Journal:  Med Biol Eng Comput        ISSN: 0140-0118            Impact factor:   2.602


  10 in total

1.  Time-saving in biological dosimetry by using the automatic metaphase finder Metafer2.

Authors:  J Weber; W Scheid; H Traut
Journal:  Mutat Res       Date:  1992-08       Impact factor: 2.433

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Authors:  K R Castleman
Journal:  J Radiat Res       Date:  1992-03       Impact factor: 2.724

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Journal:  Nature       Date:  1974-09-13       Impact factor: 49.962

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Authors:  E T Johnson; L J Goforth
Journal:  J Histochem Cytochem       Date:  1974-07       Impact factor: 2.479

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Journal:  J Histochem Cytochem       Date:  1974-07       Impact factor: 2.479

6.  Introduction to perceptual linearization of video display systems for medical image presentation.

Authors:  B M Hemminger; R E Johnston; J P Rolland; K E Muller
Journal:  J Digit Imaging       Date:  1995-02       Impact factor: 4.056

7.  A system for fluorescence metaphase finding and scoring of chromosomal translocations visualized by in situ hybridization.

Authors:  J Vrolijk; W C Sloos; F Darroudi; A T Natarajan; H J Tanke
Journal:  Int J Radiat Biol       Date:  1994-09       Impact factor: 2.694

8.  Automatic fluorescence metaphase finder speeds translocation scoring in FISH painted chromosomes.

Authors:  J Piper; M Poggensee; W Hill; R Jensen; L Ji; I Poole; M Stark; D Sudar
Journal:  Cytometry       Date:  1994-05-01

9.  Mitotic index and cell proliferation kinetics for identification of antineoplastic activity.

Authors:  E Rojas; L A Herrera; M Sordo; M E Gonsebatt; R Montero; R Rodríguez; P Ostrosky-Wegman
Journal:  Anticancer Drugs       Date:  1993-12       Impact factor: 2.248

10.  Are mitotic index and lymphocyte proliferation kinetics reproducible endpoints in genetic toxicology testing?

Authors:  E Rojas; R Montero; L A Herrera; M Sordo; M E Gonsebatt; R Rodriguez; P Ostrosky-Wegman
Journal:  Mutat Res       Date:  1992-08       Impact factor: 2.433

  10 in total
  3 in total

1.  Automatic identification of metaphase spreads and nuclei using neural networks.

Authors:  F Arámbula Cosío; L Vega; A Herrera Becerra; C Prieto Meléndez; G Corkidi
Journal:  Med Biol Eng Comput       Date:  2001-05       Impact factor: 2.602

2.  Inter-chromosome texture as a feature for automatic identification of metaphase spreads.

Authors:  L Vega-Alvarado; J Márquez; G Corkidi
Journal:  Med Biol Eng Comput       Date:  2002-07       Impact factor: 2.602

3.  Automated identification of analyzable metaphase chromosomes depicted on microscopic digital images.

Authors:  Xingwei Wang; Shibo Li; Hong Liu; Marc Wood; Wei R Chen; Bin Zheng
Journal:  J Biomed Inform       Date:  2007-07-10       Impact factor: 6.317

  3 in total

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