Literature DB >> 12227636

Inter-chromosome texture as a feature for automatic identification of metaphase spreads.

L Vega-Alvarado1, J Márquez, G Corkidi.   

Abstract

This paper reports results for a new measure of texture coarseness, as a step towards automation of metaphase finding in cell-proliferation studies. This measure is highly specific to grey-level inter-chromosome coarseness features in microscopic images of metaphase spreads and allows the texture quantification of cytological objects, analysing the intensity profile between chromosome-extrema samples. Chromosome fragments produce patterns of pixels at low resolution, and the local neighbourhood of their individual extrema presents a characteristic coarseness along intensity profiles, on randomly oriented test lines. Results of the use of this new measure on microscope images of fields of metaphases and artifacts are compared with some representative texture measures and the performance of reported metaphase finders. This new measure outperforms the latter, when applied in metaphase detection and elimination of artifacts. This coarseness feature provides a specific metaphase signature that can be used in conjunction with other morphological and textural parameters for automated metaphase discrimination.

Mesh:

Year:  2002        PMID: 12227636     DOI: 10.1007/BF02345082

Source DB:  PubMed          Journal:  Med Biol Eng Comput        ISSN: 0140-0118            Impact factor:   2.602


  12 in total

1.  Roughness feature of metaphase chromosome spreads and nuclei for automated cell proliferation analysis.

Authors:  G Corkidi; L Vega; J Márquez; E Rojas; P Ostrosky-Wegman
Journal:  Med Biol Eng Comput       Date:  1998-11       Impact factor: 2.602

2.  Automatic identification of metaphase spreads and nuclei using neural networks.

Authors:  F Arámbula Cosío; L Vega; A Herrera Becerra; C Prieto Meléndez; G Corkidi
Journal:  Med Biol Eng Comput       Date:  2001-05       Impact factor: 2.602

3.  Technical report: application of the Metafer2 fluorescence scanning system for the analysis of radiation-induced chromosome aberrations measured by FISH-chromosome painting.

Authors:  R Huber; U Kulka; T Lörch; H Braselmann; D Engert; M Figel; M Bauchinger
Journal:  Mutat Res       Date:  2001-05-31       Impact factor: 2.433

4.  Time-saving in biological dosimetry by using the automatic metaphase finder Metafer2.

Authors:  J Weber; W Scheid; H Traut
Journal:  Mutat Res       Date:  1992-08       Impact factor: 2.433

5.  Texture information in run-length matrices.

Authors:  X Tang
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

6.  Evaluation of a metaphase chromosome finder: potential application to chromosome-based radiation dosimetry.

Authors:  J R McLean; F Johnson
Journal:  Micron       Date:  1995       Impact factor: 2.251

7.  Metaphase spread detection and focus using closed circuit television.

Authors:  E T Johnson; L J Goforth
Journal:  J Histochem Cytochem       Date:  1974-07       Impact factor: 2.479

8.  The design, operation and evaluation of a high speed automatic metaphase finder.

Authors:  D K Green; P W Neurath
Journal:  J Histochem Cytochem       Date:  1974-07       Impact factor: 2.479

9.  A system for fluorescence metaphase finding and scoring of chromosomal translocations visualized by in situ hybridization.

Authors:  J Vrolijk; W C Sloos; F Darroudi; A T Natarajan; H J Tanke
Journal:  Int J Radiat Biol       Date:  1994-09       Impact factor: 2.694

10.  Are mitotic index and lymphocyte proliferation kinetics reproducible endpoints in genetic toxicology testing?

Authors:  E Rojas; R Montero; L A Herrera; M Sordo; M E Gonsebatt; R Rodriguez; P Ostrosky-Wegman
Journal:  Mutat Res       Date:  1992-08       Impact factor: 2.433

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  1 in total

Review 1.  Recent advances in morphological cell image analysis.

Authors:  Shengyong Chen; Mingzhu Zhao; Guang Wu; Chunyan Yao; Jianwei Zhang
Journal:  Comput Math Methods Med       Date:  2012-01-09       Impact factor: 2.238

  1 in total

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