Literature DB >> 10329635

A developmental switch in H4 acetylation upstream of Xist plays a role in X chromosome inactivation.

L P O'Neill1, A M Keohane, J S Lavender, V McCabe, E Heard, P Avner, N Brockdorff, B M Turner.   

Abstract

We have investigated the role of histone acetylation in X chromosome inactivation, focusing on its possible involvement in the regulation of Xist, an essential gene expressed only from the inactive X (Xi). We have identified a region of H4 hyperacetylation extending up to 120 kb upstream from the Xist somatic promoter P1. This domain includes the promoter P0, which gives rise to the unstable Xist transcript in undifferentiated cells. The hyperacetylated domain was not seen in male cells or in female XT67E1 cells, a mutant cell line heterozygous for a partially deleted Xist allele and in which an increased number of cells fail to undergo X inactivation. The hyperacetylation upstream of Xist was lost by day 7 of differentiation, when X inactivation was essentially complete. Wild-type cells differentiated in the presence of the histone deacetylase inhibitor Trichostatin A were prevented from forming a normally inactivated X, as judged by the frequency of underacetylated X chromosomes detected by immunofluorescence microscopy. Mutant XT67E1 cells, lacking hyperacetylation upstream of Xist, were less affected. We propose that (i) hyperacetylation of chromatin upstream of Xist facilitates the promoter switch that leads to stabilization of the Xist transcript and (ii) that the subsequent deacetylation of this region is essential for the further progression of X inactivation.

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Year:  1999        PMID: 10329635      PMCID: PMC1171370          DOI: 10.1093/emboj/18.10.2897

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  68 in total

1.  Differential underacetylation of histones H2A, H3 and H4 on the inactive X chromosome in human female cells.

Authors:  N Belyaev; A M Keohane; B M Turner
Journal:  Hum Genet       Date:  1996-05       Impact factor: 4.132

2.  X-Inactivation and histone H4 acetylation in embryonic stem cells.

Authors:  A M Keohane; L P O'neill; N D Belyaev; J S Lavender; B M Turner
Journal:  Dev Biol       Date:  1996-12-15       Impact factor: 3.582

3.  A 94 kb genomic sequence 3' to the murine Xist gene reveals an AT rich region containing a new testis specific gene Tsx.

Authors:  M C Simmler; D B Cunningham; P Clerc; T Vermat; B Caudron; C Cruaud; A Pawlak; C Szpirer; J Weissenbach; J M Claverie; P Avner
Journal:  Hum Mol Genet       Date:  1996-11       Impact factor: 6.150

4.  Role of late replication timing in the silencing of X-linked genes.

Authors:  R S Hansen; T K Canfield; A D Fjeld; S M Gartler
Journal:  Hum Mol Genet       Date:  1996-09       Impact factor: 6.150

5.  DNA hypomethylation can activate Xist expression and silence X-linked genes.

Authors:  B Panning; R Jaenisch
Journal:  Genes Dev       Date:  1996-08-15       Impact factor: 11.361

6.  Cloning and characterization of a murine brain specific gene Bpx and its human homologue lying within the Xic candidate region.

Authors:  C Rougeulle; P Avner
Journal:  Hum Mol Genet       Date:  1996-01       Impact factor: 6.150

7.  Histone H4 acetylation and replication timing in Chinese hamster chromosomes.

Authors:  N D Belyaev; A M Keohane; B M Turner
Journal:  Exp Cell Res       Date:  1996-06-15       Impact factor: 3.905

8.  A 450 kb transgene displays properties of the mammalian X-inactivation center.

Authors:  J T Lee; W M Strauss; J A Dausman; R Jaenisch
Journal:  Cell       Date:  1996-07-12       Impact factor: 41.582

9.  Three-dimensional reconstruction of painted human interphase chromosomes: active and inactive X chromosome territories have similar volumes but differ in shape and surface structure.

Authors:  R Eils; S Dietzel; E Bertin; E Schröck; M R Speicher; T Ried; M Robert-Nicoud; C Cremer; T Cremer
Journal:  J Cell Biol       Date:  1996-12       Impact factor: 10.539

10.  XIST RNA paints the inactive X chromosome at interphase: evidence for a novel RNA involved in nuclear/chromosome structure.

Authors:  C M Clemson; J A McNeil; H F Willard; J B Lawrence
Journal:  J Cell Biol       Date:  1996-02       Impact factor: 10.539

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  17 in total

1.  Functional analysis of the DXPas34 locus, a 3' regulator of Xist expression.

Authors:  E Debrand; C Chureau; D Arnaud; P Avner; E Heard
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

2.  Non-coding, mRNA-like RNAs database Y2K.

Authors:  V A Erdmann; M Szymanski; A Hochberg; N Groot; J Barciszewski
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

3.  Promoter-specific hypoacetylation of X-inactivated genes.

Authors:  S L Gilbert; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

Review 4.  Growth regulation of human variant histone genes and acetylation of the encoded proteins.

Authors:  D Alvelo-Ceron; L Niu; D G Collart
Journal:  Mol Biol Rep       Date:  2000-06       Impact factor: 2.316

5.  The region 3' to Xist mediates X chromosome counting and H3 Lys-4 dimethylation within the Xist gene.

Authors:  Céline Morey; Pablo Navarro; Emmanuel Debrand; Philip Avner; Claire Rougeulle; Philippe Clerc
Journal:  EMBO J       Date:  2004-01-29       Impact factor: 11.598

6.  Allele-specific underacetylation of histone H4 downstream from promoters is associated with X-inactivation in human cells.

Authors:  Harris Morrison; Peter Jeppesen
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

Review 7.  Regulation of X-chromosome inactivation by the X-inactivation centre.

Authors:  Sandrine Augui; Elphège P Nora; Edith Heard
Journal:  Nat Rev Genet       Date:  2011-06       Impact factor: 53.242

Review 8.  Dosage compensation in mammals.

Authors:  Neil Brockdorff; Bryan M Turner
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-03-02       Impact factor: 10.005

9.  Inhibition of histone deacetylation induces constitutive derepression of the beta interferon promoter and confers antiviral activity.

Authors:  E Shestakova; M T Bandu; J Doly; E Bonnefoy
Journal:  J Virol       Date:  2001-04       Impact factor: 5.103

10.  DNA methylation is linked to deacetylation of histone H3, but not H4, on the imprinted genes Snrpn and U2af1-rs1.

Authors:  R I Gregory; T E Randall; C A Johnson; S Khosla; I Hatada; L P O'Neill; B M Turner; R Feil
Journal:  Mol Cell Biol       Date:  2001-08       Impact factor: 4.272

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