Literature DB >> 10325325

Rapid identification of thermotolerant Campylobacter jejuni, Campylobacter coli, Campylobacter lari, and Campylobacter upsaliensis from various geographic locations by a GTPase-based PCR-reverse hybridization assay.

L J van Doorn1, A Verschuuren-van Haperen, A Burnens, M Huysmans, P Vandamme, B A Giesendorf, M J Blaser, W G Quint.   

Abstract

Recently, a gene from Campylobacter jejuni encoding a putative GTPase was identified. Based on two semiconserved GTP-binding sites encoded within this gene, PCR primers were selected that allow amplification of a 153-bp fragment from C. jejuni, C. coli, C. lari, and C. upsaliensis. Sequence analysis of these PCR products revealed consistent interspecies variation, which allowed the definition of species-specific probes for each of the four thermotolerant Campylobacter species. Multiple probes were used to develop a line probe assay (LiPA) that permits analysis of PCR products by a single reverse hybridization step. A total of 320 reference strains and clinical isolates from various geographic origins were tested by the GTP-based PCR-LiPA. The PCR-LiPA is highly specific in comparison with conventional identification methods, including biochemical and whole-cell protein analyses. In conclusion, a simple method has been developed for rapid and highly specific identification of thermotolerant Campylobacter species.

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Year:  1999        PMID: 10325325      PMCID: PMC84952     

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  25 in total

1.  A novel polymerase chain reaction assay for the detection and speciation of thermophilic Campylobacter spp.

Authors:  C J Jackson; A J Fox; D M Jones
Journal:  J Appl Bacteriol       Date:  1996-11

Review 2.  Identification methods for campylobacters, helicobacters, and related organisms.

Authors:  S L On
Journal:  Clin Microbiol Rev       Date:  1996-07       Impact factor: 26.132

Review 3.  Detection and identification of Campylobacter spp. using the polymerase chain reaction.

Authors:  B A Giesendorf; W G Quint
Journal:  Cell Mol Biol (Noisy-le-grand)       Date:  1995-07       Impact factor: 1.770

Review 4.  Campylobacter jejuni and the expanding spectrum of related infections.

Authors:  B M Allos; M J Blaser
Journal:  Clin Infect Dis       Date:  1995-05       Impact factor: 9.079

5.  Evaluation of API Campy in comparison with conventional methods for identification of thermophilic campylobacters.

Authors:  M B Huysmans; J D Turnidge; J H Williams
Journal:  J Clin Microbiol       Date:  1995-12       Impact factor: 5.948

6.  TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment.

Authors:  Y Van de Peer; R De Wachter
Journal:  Comput Appl Biosci       Date:  1994-09

7.  Genotypic diversity of Campylobacter lari isolated from mussels and oysters in The Netherlands.

Authors:  H P Endtz; J S Vliegenthart; P Vandamme; H W Weverink; N P van den Braak; H A Verbrugh; A van Belkum
Journal:  Int J Food Microbiol       Date:  1997-01       Impact factor: 5.277

8.  Investigation of an outbreak of Campylobacter upsaliensis in day care centers in Brussels: analysis of relationships among isolates by phenotypic and genotypic typing methods.

Authors:  H Goossens; B A Giesendorf; P Vandamme; L Vlaes; C Van den Borre; A Koeken; W G Quint; W Blomme; P Hanicq; D S Koster
Journal:  J Infect Dis       Date:  1995-11       Impact factor: 5.226

9.  Discrimination among thermophilic Campylobacter species by polymerase chain reaction amplification of 23S rRNA gene fragments.

Authors:  M Eyers; S Chapelle; G Van Camp; H Goossens; R De Wachter
Journal:  J Clin Microbiol       Date:  1993-12       Impact factor: 5.948

10.  Identification of Campylobacter jejuni on the basis of a species-specific gene that encodes a membrane protein.

Authors:  U Stucki; J Frey; J Nicolet; A P Burnens
Journal:  J Clin Microbiol       Date:  1995-04       Impact factor: 5.948

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  8 in total

1.  Evaluation of the Alexon-trend ProSpecT Campylobacter microplate assay.

Authors:  R Tolcin; M M LaSalvia; B A Kirkley; E A Vetter; F R Cockerill; G W Procop
Journal:  J Clin Microbiol       Date:  2000-10       Impact factor: 5.948

Review 2.  Specificity and performance of PCR detection assays for microbial pathogens.

Authors:  Konrad Sachse
Journal:  Mol Biotechnol       Date:  2004-01       Impact factor: 2.695

3.  Speciation of Campylobacter coli, C. jejuni, C. helveticus, C. lari, C. sputorum, and C. upsaliensis by matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Robert E Mandrell; Leslie A Harden; Anna Bates; William G Miller; William F Haddon; Clifton K Fagerquist
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

4.  Rapid identification of Campylobacter spp. by melting peak analysis of biprobes in real-time PCR.

Authors:  J M Logan; K J Edwards; N A Saunders; J Stanley
Journal:  J Clin Microbiol       Date:  2001-06       Impact factor: 5.948

5.  Colony multiplex PCR assay for identification and differentiation of Campylobacter jejuni, C. coli, C. lari, C. upsaliensis, and C. fetus subsp. fetus.

Authors:  Gehua Wang; Clifford G Clark; Tracy M Taylor; Chad Pucknell; Connie Barton; Lawrence Price; David L Woodward; Frank G Rodgers
Journal:  J Clin Microbiol       Date:  2002-12       Impact factor: 5.948

6.  Risk factors associated with Campylobacter jejuni infections in Curaçao, Netherlands Antilles.

Authors:  Hubert P Endtz; Hanneke van West; Peggy C R Godschalk; Lidewij de Haan; Yaskara Halabi; Nicole van den Braak; Barbara I Kesztyüs; Ewald Leyde; Alewijn Ott; Roel Verkooyen; Lawrence J Price; David L Woodward; Frank G Rodgers; C Wim Ang; Rinske van Koningsveld; Alex van Belkum; Izzy Gerstenbluth
Journal:  J Clin Microbiol       Date:  2003-12       Impact factor: 5.948

7.  Species-specific identification of campylobacters by partial 16S rRNA gene sequencing.

Authors:  Gregor Gorkiewicz; Gebhard Feierl; Caroline Schober; Franz Dieber; Josef Köfer; Rudolf Zechner; Ellen L Zechner
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

8.  Campylobacter Species and Neutrophilic Inflammatory Bowel Disease in Cats.

Authors:  C L Maunder; Z F Reynolds; L Peacock; E J Hall; M J Day; T A Cogan
Journal:  J Vet Intern Med       Date:  2016-06-30       Impact factor: 3.333

  8 in total

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