Literature DB >> 10319817

The structure of threonyl-tRNA synthetase-tRNA(Thr) complex enlightens its repressor activity and reveals an essential zinc ion in the active site.

R Sankaranarayanan1, A C Dock-Bregeon, P Romby, J Caillet, M Springer, B Rees, C Ehresmann, B Ehresmann, D Moras.   

Abstract

E. coli threonyl-tRNA synthetase (ThrRS) is a class II enzyme that represses the translation of its own mRNA. We report the crystal structure at 2.9 A resolution of the complex between tRNA(Thr) and ThrRS, whose structural features reveal novel strategies for providing specificity in tRNA selection. These include an amino-terminal domain containing a novel protein fold that makes minor groove contacts with the tRNA acceptor stem. The enzyme induces a large deformation of the anticodon loop, resulting in an interaction between two adjacent anticodon bases, which accounts for their prominent role in tRNA identity and translational regulation. A zinc ion found in the active site is implicated in amino acid recognition/discrimination.

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Year:  1999        PMID: 10319817     DOI: 10.1016/s0092-8674(00)80746-1

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  108 in total

1.  Correlation of deformability at a tRNA recognition site and aminoacylation specificity.

Authors:  K Y Chang; G Varani; S Bhattacharya; H Choi; W H McClain
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-12       Impact factor: 11.205

2.  Comparative genome analysis of the pathogenic spirochetes Borrelia burgdorferi and Treponema pallidum.

Authors:  G Subramanian; E V Koonin; L Aravind
Journal:  Infect Immun       Date:  2000-03       Impact factor: 3.441

3.  Structure of Hsp15 reveals a novel RNA-binding motif.

Authors:  B L Staker; P Korber; J C Bardwell; M A Saper
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

4.  A recurrent general RNA binding domain appended to plant methionyl-tRNA synthetase acts as a cis-acting cofactor for aminoacylation.

Authors:  M Kaminska; M Deniziak; P Kerjan; J Barciszewski; M Mirande
Journal:  EMBO J       Date:  2000-12-15       Impact factor: 11.598

5.  Alternative designs for construction of the class II transfer RNA tertiary core.

Authors:  T A Nissan; J J Perona
Journal:  RNA       Date:  2000-11       Impact factor: 4.942

6.  Crystal structure of the quorum-sensing protein LuxS reveals a catalytic metal site.

Authors:  M T Hilgers; M L Ludwig
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

7.  Crystal structure of a eukaryote/archaeon-like protyl-tRNA synthetase and its complex with tRNAPro(CGG).

Authors:  A Yaremchuk; S Cusack; M Tukalo
Journal:  EMBO J       Date:  2000-09-01       Impact factor: 11.598

Review 8.  Aminoacyl-tRNA synthetases: versatile players in the changing theater of translation.

Authors:  Christopher Francklyn; John J Perona; Joern Puetz; Ya-Ming Hou
Journal:  RNA       Date:  2002-11       Impact factor: 4.942

9.  Trans-editing of mischarged tRNAs.

Authors:  Ivan Ahel; Dragana Korencic; Michael Ibba; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-08       Impact factor: 11.205

10.  tRNA-mediated transcription antitermination in vitro: codon-anticodon pairing independent of the ribosome.

Authors:  Frank J Grundy; Wade C Winkler; Tina M Henkin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-06       Impact factor: 11.205

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