Literature DB >> 10235625

Structural and mutagenesis studies of leishmania triosephosphate isomerase: a point mutation can convert a mesophilic enzyme into a superstable enzyme without losing catalytic power.

J C Williams1, J P Zeelen, G Neubauer, G Vriend, J Backmann, P A Michels, A M Lambeir, R K Wierenga.   

Abstract

The dimeric enzyme triosephosphate isomerase (TIM) has a very tight and rigid dimer interface. At this interface a critical hydrogen bond is formed between the main chain oxygen atom of the catalytic residue Lys13 and the completely buried side chain of Gln65 (of the same subunit). The sequence of Leishmania mexicana TIM, closely related to Trypanosoma brucei TIM (68% sequence identity), shows that this highly conserved glutamine has been replaced by a glutamate. Therefore, the 1.8 A crystal structure of leishmania TIM (at pH 5.9) was determined. The comparison with the structure of trypanosomal TIM shows no rearrangements in the vicinity of Glu65, suggesting that its side chain is protonated and is hydrogen bonded to the main chain oxygen of Lys13. Ionization of this glutamic acid side chain causes a pH-dependent decrease in the thermal stability of leishmania TIM. The presence of this glutamate, also in its protonated state, disrupts to some extent the conserved hydrogen bond network, as seen in all other TIMs. Restoration of the hydrogen bonding network by its mutation to glutamine in the E65Q variant of leishmania TIM results in much higher stability; for example, at pH 7, the apparent melting temperature increases by 26 degrees C (57 degrees C for leishmania TIM to 83 degrees C for the E65Q variant). This mutation does not affect the kinetic properties, showing that even point mutations can convert a mesophilic enzyme into a superstable enzyme without losing catalytic power at the mesophilic temperature.

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Year:  1999        PMID: 10235625     DOI: 10.1093/protein/12.3.243

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  24 in total

1.  High resolution crystal structures of triosephosphate isomerase complexed with its suicide inhibitors: the conformational flexibility of the catalytic glutamate in its closed, liganded active site.

Authors:  Rajaram Venkatesan; Markus Alahuhta; Petri M Pihko; Rik K Wierenga
Journal:  Protein Sci       Date:  2011-07-07       Impact factor: 6.725

2.  Enhancing Protein Stability with Genetically Encoded Noncanonical Amino Acids.

Authors:  Jack C Li; Tao Liu; Yan Wang; Angad P Mehta; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2018-11-15       Impact factor: 15.419

3.  Structural Characterization and Directed Evolution of a Novel Acetyl Xylan Esterase Reveals Thermostability Determinants of the Carbohydrate Esterase 7 Family.

Authors:  Fiyinfoluwa A Adesioye; Thulani P Makhalanyane; Surendra Vikram; Bryan T Sewell; Wolf-Dieter Schubert; Don A Cowan
Journal:  Appl Environ Microbiol       Date:  2018-04-02       Impact factor: 4.792

4.  Is the catalytic activity of triosephosphate isomerase fully optimized? An investigation based on maximization of entropy production.

Authors:  Željana Bonačić Lošić; Tomislav Donđivić; Davor Juretić
Journal:  J Biol Phys       Date:  2017-01-03       Impact factor: 1.365

5.  Triosephosphate isomerase I170V alters catalytic site, enhances stability and induces pathology in a Drosophila model of TPI deficiency.

Authors:  Bartholomew P Roland; Christopher G Amrich; Charles J Kammerer; Kimberly A Stuchul; Samantha B Larsen; Sascha Rode; Anoshé A Aslam; Annie Heroux; Ronald Wetzel; Andrew P VanDemark; Michael J Palladino
Journal:  Biochim Biophys Acta       Date:  2014-10-16

Review 6.  Triosephosphate isomerase: a highly evolved biocatalyst.

Authors:  R K Wierenga; E G Kapetaniou; R Venkatesan
Journal:  Cell Mol Life Sci       Date:  2010-08-07       Impact factor: 9.261

7.  Drug targets in Leishmania.

Authors:  Bhavna Chawla; Rentala Madhubala
Journal:  J Parasit Dis       Date:  2010-10-08

8.  Structural insights from a novel invertebrate triosephosphate isomerase from Litopenaeus vannamei.

Authors:  Alonso A Lopez-Zavala; Jesus S Carrasco-Miranda; Claudia D Ramirez-Aguirre; Marisol López-Hidalgo; Claudia G Benitez-Cardoza; Adrian Ochoa-Leyva; Cesar S Cardona-Felix; Corina Diaz-Quezada; Enrique Rudiño-Piñera; Rogerio R Sotelo-Mundo; Luis G Brieba
Journal:  Biochim Biophys Acta       Date:  2016-09-07

9.  Understanding thermostability factors of Aspergillus niger PhyA phytase: a molecular dynamics study.

Authors:  I A Noorbatcha; A M Sultan; H M Salleh; Azura Amid
Journal:  Protein J       Date:  2013-04       Impact factor: 2.371

10.  Evidence of a triosephosphate isomerase non-catalytic function crucial to behavior and longevity.

Authors:  Bartholomew P Roland; Kimberly A Stuchul; Samantha B Larsen; Christopher G Amrich; Andrew P Vandemark; Alicia M Celotto; Michael J Palladino
Journal:  J Cell Sci       Date:  2013-05-02       Impact factor: 5.285

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