Literature DB >> 25463631

Triosephosphate isomerase I170V alters catalytic site, enhances stability and induces pathology in a Drosophila model of TPI deficiency.

Bartholomew P Roland1, Christopher G Amrich2, Charles J Kammerer1, Kimberly A Stuchul1, Samantha B Larsen1, Sascha Rode3, Anoshé A Aslam2, Annie Heroux4, Ronald Wetzel3, Andrew P VanDemark5, Michael J Palladino6.   

Abstract

Triosephosphate isomerase (TPI) is a glycolytic enzyme which homodimerizes for full catalytic activity. Mutations of the TPI gene elicit a disease known as TPI Deficiency, a glycolytic enzymopathy noted for its unique severity of neurological symptoms. Evidence suggests that TPI Deficiency pathogenesis may be due to conformational changes of the protein, likely affecting dimerization and protein stability. In this report, we genetically and physically characterize a human disease-associated TPI mutation caused by an I170V substitution. Human TPI(I170V) elicits behavioral abnormalities in Drosophila. An examination of hTPI(I170V) enzyme kinetics revealed this substitution reduced catalytic turnover, while assessments of thermal stability demonstrated an increase in enzyme stability. The crystal structure of the homodimeric I170V mutant reveals changes in the geometry of critical residues within the catalytic pocket. Collectively these data reveal new observations of the structural and kinetic determinants of TPI Deficiency pathology, providing new insights into disease pathogenesis.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Drosophila; Structure; Triosephosphate isomerase; Triosephosphate isomerase deficiency

Mesh:

Substances:

Year:  2014        PMID: 25463631      PMCID: PMC4268122          DOI: 10.1016/j.bbadis.2014.10.010

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  69 in total

1.  Understanding protein lids: kinetic analysis of active hinge mutants in triosephosphate isomerase.

Authors:  J Sun; N S Sampson
Journal:  Biochemistry       Date:  1999-08-31       Impact factor: 3.162

2.  The time scale of the catalytic loop motion in triosephosphate isomerase.

Authors:  S Rozovsky; A E McDermott
Journal:  J Mol Biol       Date:  2001-06-29       Impact factor: 5.469

3.  Triosephosphate isomerase catalysis is diffusion controlled. Appendix: Analysis of triose phosphate equilibria in aqueous solution by 31P NMR.

Authors:  S C Blacklow; R T Raines; W A Lim; P D Zamore; J R Knowles
Journal:  Biochemistry       Date:  1988-02-23       Impact factor: 3.162

4.  Efficient ends-out gene targeting in Drosophila.

Authors:  Juan Huang; Wenke Zhou; Annie M Watson; Yuh-Nung Jan; Yang Hong
Journal:  Genetics       Date:  2008-08-30       Impact factor: 4.562

5.  Solution-state NMR investigations of triosephosphate isomerase active site loop motion: ligand release in relation to active site loop dynamics.

Authors:  S Rozovsky; G Jogl; L Tong; A E McDermott
Journal:  J Mol Biol       Date:  2001-06-29       Impact factor: 5.469

Review 6.  Seizure and epilepsy: studies of seizure disorders in Drosophila.

Authors:  Louise Parker; Iris C Howlett; Zeid M Rusan; Mark A Tanouye
Journal:  Int Rev Neurobiol       Date:  2011       Impact factor: 3.230

7.  wasted away, a Drosophila mutation in triosephosphate isomerase, causes paralysis, neurodegeneration, and early death.

Authors:  Joshua P Gnerer; Robert A Kreber; Barry Ganetzky
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-28       Impact factor: 11.205

8.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

9.  Early mitochondrial dysfunction leads to altered redox chemistry underlying pathogenesis of TPI deficiency.

Authors:  Stacy L Hrizo; Isaac J Fisher; Daniel R Long; Joshua A Hutton; Zhaohui Liu; Michael J Palladino
Journal:  Neurobiol Dis       Date:  2013-01-12       Impact factor: 5.996

10.  Triose phosphate isomerase deficiency is caused by altered dimerization--not catalytic inactivity--of the mutant enzymes.

Authors:  Markus Ralser; Gino Heeren; Michael Breitenbach; Hans Lehrach; Sylvia Krobitsch
Journal:  PLoS One       Date:  2006-12-20       Impact factor: 3.240

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  11 in total

1.  Missense variant in TPI1 (Arg189Gln) causes neurologic deficits through structural changes in the triosephosphate isomerase catalytic site and reduced enzyme levels in vivo.

Authors:  Bartholomew P Roland; Kristen R Richards; Stacy L Hrizo; Samantha Eicher; Zackery J Barile; Tien-Chien Chang; Grace Savon; Paola Bianchi; Elisa Fermo; Bianca Maria Ricerca; Luca Tortorolo; Jerry Vockley; Andrew P VanDemark; Michael J Palladino
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2019-05-07       Impact factor: 5.187

2.  Active-Site Glu165 Activation in Triosephosphate Isomerase and Its Deprotonation Kinetics.

Authors:  Hua Deng; R Brian Dyer; Robert Callender
Journal:  J Phys Chem B       Date:  2019-05-02       Impact factor: 2.991

3.  Protein coding mitochondrial-targeted RNAs rescue mitochondrial disease in vivo.

Authors:  Desiree M Markantone; Atif Towheed; Aaron T Crain; Jessica M Collins; Alicia M Celotto; Michael J Palladino
Journal:  Neurobiol Dis       Date:  2018-06-13       Impact factor: 5.996

4.  New strategy for drug discovery by large-scale association analysis of molecular networks of different species.

Authors:  Bo Zhang; Yingxue Fu; Chao Huang; Chunli Zheng; Ziyin Wu; Wenjuan Zhang; Xiaoyan Yang; Fukai Gong; Yuerong Li; Xiaoyu Chen; Shuo Gao; Xuetong Chen; Yan Li; Aiping Lu; Yonghua Wang
Journal:  Sci Rep       Date:  2016-02-25       Impact factor: 4.379

5.  Enzyme Architecture: Modeling the Operation of a Hydrophobic Clamp in Catalysis by Triosephosphate Isomerase.

Authors:  Yashraj S Kulkarni; Qinghua Liao; Dušan Petrović; Dennis M Krüger; Birgit Strodel; Tina L Amyes; John P Richard; Shina C L Kamerlin
Journal:  J Am Chem Soc       Date:  2017-07-19       Impact factor: 15.419

6.  Natural Products as New Treatment Options for Trichomoniasis: A Molecular Docking Investigation.

Authors:  Mary Snow Setzer; Kendall G Byler; Ifedayo Victor Ogungbe; William N Setzer
Journal:  Sci Pharm       Date:  2017-01-27

7.  Novel and selective inactivators of Triosephosphate isomerase with anti-trematode activity.

Authors:  Florencia Ferraro; Ileana Corvo; Lucia Bergalli; Andrea Ilarraz; Mauricio Cabrera; Jorge Gil; Brian M Susuki; Conor R Caffrey; David J Timson; Xavier Robert; Christophe Guillon; Teresa Freire; Guzmán Álvarez
Journal:  Sci Rep       Date:  2020-02-13       Impact factor: 4.379

8.  Low catalytic activity is insufficient to induce disease pathology in triosephosphate isomerase deficiency.

Authors:  Joanna Segal; Michael Mülleder; Antje Krüger; Thure Adler; Manuela Scholze-Wittler; Lore Becker; Julia Calzada-Wack; Lillian Garrett; Sabine M Hölter; Birgit Rathkolb; Jan Rozman; Ildiko Racz; Ralf Fischer; Dirk H Busch; Frauke Neff; Martin Klingenspor; Thomas Klopstock; Nana-Maria Grüning; Steve Michel; Beata Lukaszewska-McGreal; Ingo Voigt; Ludger Hartmann; Bernd Timmermann; Hans Lehrach; Eckhard Wolf; Wolfgang Wurst; Valérie Gailus-Durner; Helmut Fuchs; Martin H de Angelis; Heinrich Schrewe; Mariia Yuneva; Markus Ralser
Journal:  J Inherit Metab Dis       Date:  2019-06-11       Impact factor: 4.750

9.  A High-Content Screening Assay for Small Molecules That Stabilize Mutant Triose Phosphate Isomerase (TPI) as Treatments for TPI Deficiency.

Authors:  Andreas Vogt; Samantha L Eicher; Tracey D Myers; Stacy L Hrizo; Laura L Vollmer; E Michael Meyer; Michael J Palladino
Journal:  SLAS Discov       Date:  2021-06-24       Impact factor: 3.341

10.  Structural and Genetic Studies Demonstrate Neurologic Dysfunction in Triosephosphate Isomerase Deficiency Is Associated with Impaired Synaptic Vesicle Dynamics.

Authors:  Bartholomew P Roland; Alison M Zeccola; Samantha B Larsen; Christopher G Amrich; Aaron D Talsma; Kimberly A Stuchul; Annie Heroux; Edwin S Levitan; Andrew P VanDemark; Michael J Palladino
Journal:  PLoS Genet       Date:  2016-03-31       Impact factor: 5.917

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