Literature DB >> 10199660

Beta-hairpin and beta-sheet formation in designed linear peptides.

M Ramírez-Alvarado1, T Kortemme, F J Blanco, L Serrano.   

Abstract

Recent knowledge about the determinants of beta-sheet formation and stability has notably been improved by the structural analysis of model peptides with beta-hairpin structure in aqueous solution. Several experimental studies have shown that the turn region residues can not only determine the stability, but also the conformation of the beta-hairpin. Specific interstrand side-chain interactions, hydrophobic and polar, have been found to be important stabilizing interactions. The knowledge acquired in the recent years from peptide systems, together with the information gathered from mutants in proteins, and the analysis of known protein structures, has led to successful design of a folded three-stranded monomeric beta-sheet structure.

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Year:  1999        PMID: 10199660     DOI: 10.1016/s0968-0896(98)00215-6

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  27 in total

1.  Structural characterization of a mutant peptide derived from ubiquitin: implications for protein folding.

Authors:  R Zerella; P Y Chen; P A Evans; A Raine; D H Williams
Journal:  Protein Sci       Date:  2000-11       Impact factor: 6.725

2.  Using flexible loop mimetics to extend phi-value analysis to secondary structure interactions.

Authors:  N Ferguson; J R Pires; F Toepert; C M Johnson; Y P Pan; R Volkmer-Engert; J Schneider-Mergener; V Daggett; H Oschkinat; A Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-30       Impact factor: 11.205

3.  Combinatorial approaches: a new tool to search for highly structured beta-hairpin peptides.

Authors:  Maria Teresa Pastor; Manuela López de la Paz; Emmanuel Lacroix; Luis Serrano; Enrique Pérez-Payá
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-08       Impact factor: 11.205

4.  Elongation of the BH8 beta-hairpin peptide: Electrostatic interactions in beta-hairpin formation and stability.

Authors:  M Ramírez-Alvarado; F J Blanco; L Serrano
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

5.  13C(alpha) and 13C(beta) chemical shifts as a tool to delineate beta-hairpin structures in peptides.

Authors:  C M Santiveri; M Rico; M A Jiménez
Journal:  J Biomol NMR       Date:  2001-04       Impact factor: 2.835

6.  Like-charged residues at the ends of oligoalanine sequences might induce a chain reversal.

Authors:  Joanna Makowska; Adam Liwo; Wioletta Zmudzińska; Agnieszka Lewandowska; Lech Chmurzyński; Harold A Scheraga
Journal:  Biopolymers       Date:  2011-12-09       Impact factor: 2.505

7.  Nanosecond temperature jump relaxation dynamics of cyclic beta-hairpin peptides.

Authors:  Shelia J Maness; Stefan Franzen; Alan C Gibbs; Timothy P Causgrove; R Brian Dyer
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

8.  Turn stability in beta-hairpin peptides: Investigation of peptides containing 3:5 type I G1 bulge turns.

Authors:  Tamas Blandl; Andrea G Cochran; Nicholas J Skelton
Journal:  Protein Sci       Date:  2003-02       Impact factor: 6.725

9.  Folding events in the 21-30 region of amyloid beta-protein (Abeta) studied in silico.

Authors:  Jose M Borreguero; Brigita Urbanc; Noel D Lazo; Sergey V Buldyrev; David B Teplow; H Eugene Stanley
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-18       Impact factor: 11.205

10.  Quantifying amino acid conformational preferences and side-chain-side-chain interactions in beta-hairpins.

Authors:  Scott T Phillips; Giovanni Piersanti; Paul A Bartlett
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-14       Impact factor: 11.205

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