Literature DB >> 10097156

Evolution of microbial diversity during prolonged starvation.

S E Finkel1, R Kolter.   

Abstract

Models of evolutionary processes postulate that new alleles appear in populations through random spontaneous mutation. Alleles that confer a competitive advantage in particular environments are selected and populations can be taken over by individuals expressing these advantageous mutations. We have studied the evolutionary process by using Escherichia coli cultures incubated for prolonged periods of time in stationary phase. The populations of surviving cells were shown to be highly dynamic, even after many months of incubation. Evolution proceeded along different paths even when the initial conditions were identical. As cultures aged, the takeovers by fitter mutants were incomplete, resulting in the coexistence of multiple mutant forms and increased microbial diversity. Thus, the study of bacterial populations in stationary phase provides a model system for understanding the evolution of diversity in natural populations.

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Year:  1999        PMID: 10097156      PMCID: PMC22413          DOI: 10.1073/pnas.96.7.4023

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Nonadaptive mutations occur on the F' episome during adaptive mutation conditions in Escherichia coli.

Authors:  P L Foster
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

Review 2.  GASPing for life in stationary phase.

Authors:  M M Zambrano; R Kolter
Journal:  Cell       Date:  1996-07-26       Impact factor: 41.582

3.  Punctuated evolution caused by selection of rare beneficial mutations.

Authors:  S F Elena; V S Cooper; R E Lenski
Journal:  Science       Date:  1996-06-21       Impact factor: 47.728

4.  Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutation.

Authors:  J Torkelson; R S Harris; M J Lombardo; J Nagendran; C Thulin; S M Rosenberg
Journal:  EMBO J       Date:  1997-06-02       Impact factor: 11.598

5.  Microbial genetics. Hypermutation under stress.

Authors:  B A Bridges
Journal:  Nature       Date:  1997-06-05       Impact factor: 49.962

6.  Role of mutator alleles in adaptive evolution.

Authors:  F Taddei; M Radman; J Maynard-Smith; B Toupance; P H Gouyon; B Godelle
Journal:  Nature       Date:  1997-06-12       Impact factor: 49.962

Review 7.  Stable DNA replication: interplay between DNA replication, homologous recombination, and transcription.

Authors:  T Kogoma
Journal:  Microbiol Mol Biol Rev       Date:  1997-06       Impact factor: 11.056

8.  Evolution of high mutation rates in experimental populations of E. coli.

Authors:  P D Sniegowski; P J Gerrish; R E Lenski
Journal:  Nature       Date:  1997-06-12       Impact factor: 49.962

9.  Evolution of Escherichia coli during growth in a constant environment.

Authors:  R B Helling; C N Vargas; J Adams
Journal:  Genetics       Date:  1987-07       Impact factor: 4.562

Review 10.  Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations.

Authors:  R E Lenski; M Travisano
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-19       Impact factor: 11.205

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  120 in total

1.  Mutations enhancing amino acid catabolism confer a growth advantage in stationary phase.

Authors:  E R Zinser; R Kolter
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

2.  Emergence of homeostasis and "noise imprinting" in an evolution model.

Authors:  M D Stern
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-14       Impact factor: 11.205

3.  Experimental analysis of molecular events during mutational periodic selections in bacterial evolution.

Authors:  L Notley-McRobb; T Ferenci
Journal:  Genetics       Date:  2000-12       Impact factor: 4.562

4.  Prolonged stationary-phase incubation selects for lrp mutations in Escherichia coli K-12.

Authors:  E R Zinser; R Kolter
Journal:  J Bacteriol       Date:  2000-08       Impact factor: 3.490

5.  Regulation of mutY and nature of mutator mutations in Escherichia coli populations under nutrient limitation.

Authors:  Lucinda Notley-McRobb; Rachel Pinto; Shona Seeto; Thomas Ferenci
Journal:  J Bacteriol       Date:  2002-02       Impact factor: 3.490

Review 6.  Role of genomic typing in taxonomy, evolutionary genetics, and microbial epidemiology.

Authors:  A van Belkum; M Struelens; A de Visser; H Verbrugh; M Tibayrenc
Journal:  Clin Microbiol Rev       Date:  2001-07       Impact factor: 26.132

7.  Survival response and rearrangement of plasmid DNA of Lactococcus lactis during long-term starvation.

Authors:  W S Kim; J H Park; J Ren; P Su; N W Dunn
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

8.  Evolutionary cheating in Escherichia coli stationary phase cultures.

Authors:  M Vulic; R Kolter
Journal:  Genetics       Date:  2001-06       Impact factor: 4.562

9.  Bacterial evolution through the selective loss of beneficial Genes. Trade-offs in expression involving two loci.

Authors:  Erik R Zinser; Dominique Schneider; Michel Blot; Roberto Kolter
Journal:  Genetics       Date:  2003-08       Impact factor: 4.562

10.  Genomic diversification among archival strains of Salmonella enterica serovar typhimurium LT7.

Authors:  Gui-Rong Liu; Kelly Edwards; Abraham Eisenstark; Ying-Mei Fu; Wei-Qiao Liu; Kenneth E Sanderson; Randal N Johnston; Shu-Lin Liu
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

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