Literature DB >> 10090722

Translational induction of heat shock transcription factor sigma32: evidence for a built-in RNA thermosensor.

M T Morita1, Y Tanaka, T S Kodama, Y Kyogoku, H Yanagi, T Yura.   

Abstract

Induction of heat shock proteins in Escherichia coli is primarily caused by increased cellular levels of the heat shock sigma-factor sigma32 encoded by the rpoH gene. Increased sigma32 levels result from both enhanced synthesis and stabilization. Previous work indicated that sigma32 synthesis is induced at the translational level and is mediated by the mRNA secondary structure formed within the 5'-coding sequence of rpoH, including the translation initiation region. To understand the mechanism of heat induction of sigma32 synthesis further, we analyzed expression of rpoH-lacZ gene fusions with altered stability of mRNA structure before and after heat shock. A clear correlation was found between the stability and expression or the extent of heat induction. Temperature-melting profiles of mRNAs with or without mutations correlated well with the expression patterns of fusion genes carrying the corresponding mutations in vivo. Furthermore, temperature dependence of mRNA-30S ribosome-tRNAfMet complex formation with wild-type or mutant mRNAs in vitro agreed well with that of the expression of gene fusions in vivo. Our results support a novel mechanism in which partial melting of mRNA secondary structure at high temperature enhances ribosome entry and translational initiation without involvement of other cellular components, that is, intrinsic mRNA stability controls synthesis of a transcriptional regulator.

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Year:  1999        PMID: 10090722      PMCID: PMC316556          DOI: 10.1101/gad.13.6.655

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  38 in total

1.  Secondary structure of the ribosome binding site determines translational efficiency: a quantitative analysis.

Authors:  M H de Smit; J van Duin
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

2.  Translational regulation of sigma 32 synthesis: requirement for an internal control element.

Authors:  A S Kamath-Loeb; C A Gross
Journal:  J Bacteriol       Date:  1991-06       Impact factor: 3.490

3.  Modulation of stability of the Escherichia coli heat shock regulatory factor sigma.

Authors:  K Tilly; J Spence; C Georgopoulos
Journal:  J Bacteriol       Date:  1989-03       Impact factor: 3.490

4.  DnaK, DnaJ, and GrpE heat shock proteins negatively regulate heat shock gene expression by controlling the synthesis and stability of sigma 32.

Authors:  D Straus; W Walter; C A Gross
Journal:  Genes Dev       Date:  1990-12       Impact factor: 11.361

Review 5.  Is hsp70 the cellular thermometer?

Authors:  E A Craig; C A Gross
Journal:  Trends Biochem Sci       Date:  1991-04       Impact factor: 13.807

6.  Interplay of two cis-acting mRNA regions in translational control of sigma 32 synthesis during the heat shock response of Escherichia coli.

Authors:  H Nagai; H Yuzawa; T Yura
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-01       Impact factor: 11.205

7.  The initiation of translation in E. coli: apparent base pairing between the 16srRNA and downstream sequences of the mRNA.

Authors:  M L Sprengart; H P Fatscher; E Fuchs
Journal:  Nucleic Acids Res       Date:  1990-04-11       Impact factor: 16.971

Review 8.  Control of prokaryotic translational initiation by mRNA secondary structure.

Authors:  M H de Smit; J van Duin
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1990

Review 9.  Posttranscriptional regulatory mechanisms in Escherichia coli.

Authors:  L Gold
Journal:  Annu Rev Biochem       Date:  1988       Impact factor: 23.643

Review 10.  On finding all suboptimal foldings of an RNA molecule.

Authors:  M Zuker
Journal:  Science       Date:  1989-04-07       Impact factor: 47.728

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  96 in total

1.  Mutation analysis of the 5' untranslated region of the cold shock cspA mRNA of Escherichia coli.

Authors:  K Yamanaka; M Mitta; M Inouye
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

2.  Dynamic interplay between antagonistic pathways controlling the sigma 32 level in Escherichia coli.

Authors:  M T Morita; M Kanemori; H Yanagi; T Yura
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

3.  A mRNA-based thermosensor controls expression of rhizobial heat shock genes.

Authors:  A Nocker; T Hausherr; S Balsiger; N P Krstulovic; H Hennecke; F Narberhaus
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

4.  Signal transduction cascade for regulation of RpoS: temperature regulation of DsrA.

Authors:  F Repoila; S Gottesman
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

5.  Regulation of the alternative sigma factor sigma(E) during initiation, adaptation, and shutoff of the extracytoplasmic heat shock response in Escherichia coli.

Authors:  Sarah E Ades; Irina L Grigorova; Carol A Gross
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

6.  Structure-function studies of Escherichia coli RpoH (sigma32) by in vitro linker insertion mutagenesis.

Authors:  Franz Narberhaus; Sylvia Balsiger
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

Review 7.  Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase.

Authors:  Regine Hengge-Aronis
Journal:  Microbiol Mol Biol Rev       Date:  2002-09       Impact factor: 11.056

Review 8.  Bacterial RNA thermometers: molecular zippers and switches.

Authors:  Jens Kortmann; Franz Narberhaus
Journal:  Nat Rev Microbiol       Date:  2012-03-16       Impact factor: 60.633

Review 9.  Regulatory RNAs in bacteria.

Authors:  Lauren S Waters; Gisela Storz
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

10.  The RpoH-mediated stress response in Neisseria gonorrhoeae is regulated at the level of activity.

Authors:  Lina Laskos; Catherine S Ryan; Janet A M Fyfe; John K Davies
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

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