Literature DB >> 10037802

The involvement of gRNA-binding protein gBP21 in RNA editing-an in vitro and in vivo analysis.

L Lambert1, U F Müller, A E Souza, H U Göringer.   

Abstract

RNA editing in the parasitic organism Trypanosoma brucei is characterised by the insertion and deletion of uridylate residues into otherwise incomplete primary transcripts. The processing reaction is a required pathway for the expression of most mitochondrial genes and proceeds by a cascade of enzyme-catalysed steps. RNA editing involves one or more macromolecular ribonucleoprotein complexes which are likely to interact with additional components as the reaction proceeds. Here we examined the involvement of the gRNA-binding polypeptide gBP21, a protein which has been demonstrated to be associated with active RNA editing complexes. We show that in vitro RNA editing can be suppressed by the addition of a gBP21-specific antibody or by immunodepletion of the protein. By creating a gBP21 knockout mutant we analysed the requirement for the protein in vivo. gBP21(-) trypanosomes are viable as bloodstream stage cells and contain edited mRNAs. However, the knockout mutant is not capable of differentiating from the bloodstream to the insect life cycle stage in vitro. Moreover, mutant cells are characterised by a low mitochondrial transcript abundance. Together, these data establish that gBP21 contributes a non-essential function to the RNA editing reaction and further suggest that the protein is involved in additional mitochondrial processes which impact a larger pool of mitochondrial transcripts.

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Year:  1999        PMID: 10037802      PMCID: PMC148334          DOI: 10.1093/nar/27.6.1429

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  31 in total

1.  Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold.

Authors:  J Cruz-Reyes; A Zhelonkina; L Rusche; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

2.  Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex.

Authors:  A K Panigrahi; S P Gygi; N L Ernst; R P Igo; S S Palazzo; A Schnaufer; D S Weston; N Carmean; R Salavati; R Aebersold; K D Stuart
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

3.  Annealing of RNA editing substrates facilitated by guide RNA-binding protein gBP21.

Authors:  U F Müller; L Lambert; H U Göringer
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

4.  Mechanism of the gBP21-mediated RNA/RNA annealing reaction: matchmaking and charge reduction.

Authors:  Ulrich F Müller; H Ulrich Göringer
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

5.  Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

Authors:  C E Huang; J Cruz-Reyes; A G Zhelonkina; S O'Hearn; E Wirtz; B Sollner-Webb
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

6.  Composition of the editing complex of Trypanosoma brucei.

Authors:  K Stuart; A K Panigrahi; A Schnaufer; M Drozdz; C Clayton; R Salavati
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-01-29       Impact factor: 6.237

7.  Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva; Robert E Nelson; Guanghan Gao; Agda M Simpson; Xuedong Kang; Arnold M Falick; Sandro Sbicego; Larry Simpson
Journal:  EMBO J       Date:  2003-02-17       Impact factor: 11.598

Review 8.  Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates.

Authors:  Julius Lukes; Hassan Hashimi; Alena Zíková
Journal:  Curr Genet       Date:  2005-11-04       Impact factor: 3.886

9.  RBP16 is a multifunctional gene regulatory protein involved in editing and stabilization of specific mitochondrial mRNAs in Trypanosoma brucei.

Authors:  Michel Pelletier; Laurie K Read
Journal:  RNA       Date:  2003-04       Impact factor: 4.942

10.  Mass spectrometric analysis of the editosome and other multiprotein complexes in Trypanosoma brucei.

Authors:  Aswini K Panigrahi; Thomas E Allen; Kenneth Stuart; Paul A Haynes; Steven P Gygi
Journal:  J Am Soc Mass Spectrom       Date:  2003-07       Impact factor: 3.109

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