Literature DB >> 10028254

Proposal to transfer Halococcus turkmenicus, Halobacterium trapanicum JCM 9743 and strain GSL-11 to Haloterrigena turkmenica gen. nov., comb. nov.

A Ventosa1, M C Gutiérrez, M Kamekura, M L Dyall-Smith.   

Abstract

The 16S rRNA gene sequences of Halococcus saccharolyticus and Halococcus salifodinae were closely related (94.5-94.7% similarity) to that of Halococcus morrhuae, the type species of the genus Halococcus. However, Halococcus turkmenicus was distinct from the other members of this genus, with low 16S rRNA similarities when compared to Halococcus morrhuae (88.7%). On the basis of phylogenetic tree reconstruction, detection of signature bases and DNA-DNA hybridization data, it is proposed to transfer Halococcus turkmenicus to a novel genus, Haloterrigena, as Haloterrigena turkmenica gen. nov., comb. nov., and to accommodate Halobacterium trapanicum JCM 9743 and strain GSL-11 in the same species. On the basis of morphological, cultural and 16S rRNA sequence data, it is also proposed that the culture collection strains of Halobacterium trapanicum NCIMB 767, ATCC 43102 and JCM 8979 should be renamed as Halococcus sp.

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Year:  1999        PMID: 10028254     DOI: 10.1099/00207713-49-1-131

Source DB:  PubMed          Journal:  Int J Syst Bacteriol        ISSN: 0020-7713


  9 in total

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2.  Genome sequence of Halorubrum sp. strain T3, an extremely halophilic archaeon harboring a virus-like element.

Authors:  Shaoxing Chen; Chuanming Wang; Zhiwei Zhao; Zhu L Yang
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

3.  Halocin C8: an antimicrobial peptide distributed among four halophilic archaeal genera: Natrinema, Haloterrigena, Haloferax, and Halobacterium.

Authors:  Alison Besse; Manon Vandervennet; Christophe Goulard; Jean Peduzzi; Stéphanie Isaac; Sylvie Rebuffat; Alyssa Carré-Mlouka
Journal:  Extremophiles       Date:  2017-04-06       Impact factor: 2.395

4.  Haloterrigena gelatinilytica sp. nov., a new extremely halophilic archaeon isolated from salt-lake.

Authors:  Bing-Bing Liu; Nimaichand Salam; Manik Prabhu Narsing Rao; Shuang Cheng; Yuan-Guo Xie; Lai-You Wang; Yuan-Ru Zhang; Xin-Yuan Yu; Shu-Xian Guo; Wen-Jun Li
Journal:  Arch Microbiol       Date:  2022-02-15       Impact factor: 2.552

5.  His1, an archaeal virus of the Fuselloviridae family that infects Haloarcula hispanica.

Authors:  C Bath; M L Dyall-Smith
Journal:  J Virol       Date:  1998-11       Impact factor: 5.103

6.  PH1: an archaeovirus of Haloarcula hispanica related to SH1 and HHIV-2.

Authors:  Kate Porter; Sen-Lin Tang; Chung-Pin Chen; Pei-Wen Chiang; Mei-Jhu Hong; Mike Dyall-Smith
Journal:  Archaea       Date:  2013-03-21       Impact factor: 3.273

7.  Complete genome sequence of Haloterrigena turkmenica type strain (4k).

Authors:  Elisabeth Saunders; Brian J Tindall; Regine Fähnrich; Alla Lapidus; Alex Copeland; Tijana Glavina Del Rio; Susan Lucas; Feng Chen; Hope Tice; Jan-Fang Cheng; Cliff Han; John C Detter; David Bruce; Lynne Goodwin; Patrick Chain; Sam Pitluck; Amrita Pati; Natalia Ivanova; Konstantinos Mavromatis; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Thomas Brettin; Manfred Rohde; Markus Göker; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Hans-Peter Klenk; Nikos C Kyrpides
Journal:  Stand Genomic Sci       Date:  2010-02-28

8.  Properties of a cryptic lysyl oxidase from haloarchaeon Haloterrigena turkmenica.

Authors:  Nikolay B Pestov; Daniel V Kalinovsky; Tatyana D Larionova; Alia Z Zakirova; Nikolai N Modyanov; Irina A Okkelman; Tatyana V Korneenko
Journal:  PeerJ       Date:  2019-04-05       Impact factor: 2.984

9.  Genome sequence of the haloarchaeon Haloterrigena jeotgali type strain A29(T) isolated from salt-fermented food.

Authors:  In-Tae Cha; Mi-Hwa Lee; Byung-Yong Kim; Yong-Joon Cho; Dae-Won Kim; Kyung June Yim; Hye Seon Song; Myung-Ji Seo; Jin-Kyu Rhee; Jong-Soon Choi; Hak-Jong Choi; Changmann Yoon; Seong Woon Roh; Young-Do Nam
Journal:  Stand Genomic Sci       Date:  2015-08-05
  9 in total

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