Literature DB >> 10021418

Mechanism and specificity of the terminal thioesterase domain from the erythromycin polyketide synthase.

R S Gokhale1, D Hunziker, D E Cane, C Khosla.   

Abstract

BACKGROUND: Polyketides are important compounds with antibiotic and anticancer activities. Several modular polyketide synthases (PKSs) contain a terminal thioesterase (TE) domain probably responsible for the release and concomitant cyclization of the fully processed polyketide chain. Because the TE domain influences qualitative aspects of product formation by engineered PKSs, its mechanism and specificity are of considerable interest.
RESULTS: The TE domain of the 6-deoxyerythronolide B synthase was overexpressed in Escherichia coli. When tested against a set of N-acetyl cysteamine thioesters the TE domain did not act as a cyclase, but showed significant hydrolytic specificity towards substrates that mimic important features of its natural substrate. Also the overall rate of polyketide chain release was strongly enhanced by a covalent connection between the TE domain and the terminal PKS module (by as much as 100-fold compared with separate TE and PKS 'domains').
CONCLUSIONS: The inability of the TE domain alone to catalyze cyclization suggests that macrocycle formation results from the combined action of the TE domain and a PKS module. The chain-length and stereochemical preferences of the TE domain might be relevant in the design and engineered biosynthesis of certain novel polyketides. Our results also suggest that the TE domain might loop back to catalyze the release of polyketide chains from both terminal and pre-terminal modules, which may explain the ability of certain naturally occurring PKSs, such as the picromycin synthase, to generate both 12-membered and 14-membered macrolide antibiotics.

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Year:  1999        PMID: 10021418     DOI: 10.1016/S1074-5521(99)80008-8

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  35 in total

1.  Crystal structure of the macrocycle-forming thioesterase domain of the erythromycin polyketide synthase: versatility from a unique substrate channel.

Authors:  S C Tsai; L J Miercke; J Krucinski; R Gokhale; J C Chen; P G Foster; D E Cane; C Khosla; R M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-18       Impact factor: 11.205

2.  Regeneration of misprimed nonribosomal peptide synthetases by type II thioesterases.

Authors:  Dirk Schwarzer; Henning D Mootz; Uwe Linne; Mohamed A Marahiel
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-16       Impact factor: 11.205

3.  A method for prediction of the locations of linker regions within large multifunctional proteins, and application to a type I polyketide synthase.

Authors:  Daniel W Udwary; Matthew Merski; Craig A Townsend
Journal:  J Mol Biol       Date:  2002-10-25       Impact factor: 5.469

4.  Microarray analysis of the Mycobacterium tuberculosis transcriptional response to the acidic conditions found in phagosomes.

Authors:  Mark A Fisher; Bonnie B Plikaytis; Thomas M Shinnick
Journal:  J Bacteriol       Date:  2002-07       Impact factor: 3.490

5.  Nonprocessive [2 + 2]e- off-loading reductase domains from mycobacterial nonribosomal peptide synthetases.

Authors:  Arush Chhabra; Asfarul S Haque; Ravi Kant Pal; Aneesh Goyal; Rajkishore Rai; Seema Joshi; Santosh Panjikar; Santosh Pasha; Rajan Sankaranarayanan; Rajesh S Gokhale
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-26       Impact factor: 11.205

Review 6.  Thioesterases: a new perspective based on their primary and tertiary structures.

Authors:  David C Cantu; Yingfei Chen; Peter J Reilly
Journal:  Protein Sci       Date:  2010-07       Impact factor: 6.725

Review 7.  What can a chemist learn from nature's macrocycles?--a brief, conceptual view.

Authors:  Ludger A Wessjohann; Eelco Ruijter; Daniel Garcia-Rivera; Wolfgang Brandt
Journal:  Mol Divers       Date:  2005       Impact factor: 2.943

8.  Recycling of Overactivated Acyls by a Type II Thioesterase during Calcimycin Biosynthesis in Streptomyces chartreusis NRRL 3882.

Authors:  Hao Wu; Jingdan Liang; Lixia Gou; Qiulin Wu; Wei-Jun Liang; Xiufen Zhou; Ian J Bruce; Zixin Deng; Zhijun Wang
Journal:  Appl Environ Microbiol       Date:  2018-05-31       Impact factor: 4.792

9.  Interrogating the molecular basis for multiple macrolactone ring formation by the pikromycin polyketide synthase.

Authors:  Jeffrey D Kittendorf; Brian J Beck; Tonia J Buchholz; Wolfgang Seufert; David H Sherman
Journal:  Chem Biol       Date:  2007-08

10.  Structural basis for binding specificity between subclasses of modular polyketide synthase docking domains.

Authors:  Tonia J Buchholz; Todd W Geders; Frank E Bartley; Kevin A Reynolds; Janet L Smith; David H Sherman
Journal:  ACS Chem Biol       Date:  2009-01-16       Impact factor: 5.100

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