Literature DB >> 9988775

Activation of Rho-dependent transcription termination by NusG. Dependence on terminator location and acceleration of RNA release.

C M Burns1, W L Nowatzke, J P Richardson.   

Abstract

There is a kinetic limitation to Rho function at the first intragenic terminator in the lacZ gene (tiZ1) which can be overcome by NusG: Rho can terminate transcription with slowly moving, but not rapidly moving, RNA polymerase unless NusG is also present. Here we report further studies with two other Rho-dependent terminators that are not kinetically limited (tiZ2 and lambda tR1) which show that the requirement for NusG depends on the properties of the terminator and its location in the transcription unit. NusG is also shown to increase the rate of Rho-mediated dissociation of transcription complexes arrested at a specific termination stop point in the tiZ1 region and the rates of dissociation with three different Rho factors and two different terminators correlated with their sensitivity to RNA polymerase elongation kinetics. These results suggest a model of NusG function which involves an alteration in the susceptibility of the transcription complex to Rho action which allows termination to occur within the short kinetic window when RNA polymerase is traversing the termination region.

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Year:  1999        PMID: 9988775     DOI: 10.1074/jbc.274.8.5245

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  14 in total

1.  Functional specialization of transcription elongation factors.

Authors:  Georgiy A Belogurov; Rachel A Mooney; Vladimir Svetlov; Robert Landick; Irina Artsimovitch
Journal:  EMBO J       Date:  2008-12-18       Impact factor: 11.598

Review 2.  RNA polymerase elongation factors.

Authors:  Jeffrey W Roberts; Smita Shankar; Joshua J Filter
Journal:  Annu Rev Microbiol       Date:  2008       Impact factor: 15.500

3.  A role for Rho-dependent polarity in gene regulation by a noncoding small RNA.

Authors:  Lionello Bossi; Annie Schwartz; Benoit Guillemardet; Marc Boudvillain; Nara Figueroa-Bossi
Journal:  Genes Dev       Date:  2012-08-15       Impact factor: 11.361

Review 4.  Ubiquitous transcription factors display structural plasticity and diverse functions: NusG proteins - Shifting shapes and paradigms.

Authors:  Monali NandyMazumdar; Irina Artsimovitch
Journal:  Bioessays       Date:  2015-01-15       Impact factor: 4.345

5.  The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rho-dependent terminators.

Authors:  Makhlouf Rabhi; Olivier Espéli; Annie Schwartz; Bastien Cayrol; A Rachid Rahmouni; Véronique Arluison; Marc Boudvillain
Journal:  EMBO J       Date:  2011-06-14       Impact factor: 11.598

6.  Compromised factor-dependent transcription termination in a nusA mutant of Escherichia coli: spectrum of termination efficiencies generated by perturbations of Rho, NusG, NusA, and H-NS family proteins.

Authors:  Shivalika Saxena; J Gowrishankar
Journal:  J Bacteriol       Date:  2011-05-20       Impact factor: 3.490

7.  Molecular Basis of NusG-mediated Regulation of Rho-dependent Transcription Termination in Bacteria.

Authors:  Vishalini Valabhoju; Sonia Agrawal; Ranjan Sen
Journal:  J Biol Chem       Date:  2016-09-07       Impact factor: 5.157

8.  Escherichia coli transcription factor NusG binds to 70S ribosomes.

Authors:  Shivalika Saxena; Kamila K Myka; Robert Washburn; Nina Costantino; Donald L Court; Max E Gottesman
Journal:  Mol Microbiol       Date:  2018-04-06       Impact factor: 3.501

9.  Two structurally independent domains of E. coli NusG create regulatory plasticity via distinct interactions with RNA polymerase and regulators.

Authors:  Rachel Anne Mooney; Kristian Schweimer; Paul Rösch; Max Gottesman; Robert Landick
Journal:  J Mol Biol       Date:  2009-06-03       Impact factor: 5.469

Review 10.  Rho-dependent transcription termination: more questions than answers.

Authors:  Sharmistha Banerjee; Jisha Chalissery; Irfan Bandey; Ranjan Sen
Journal:  J Microbiol       Date:  2006-02       Impact factor: 3.422

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