Literature DB >> 9973369

Chromosomal changes during experimental evolution in laboratory populations of Escherichia coli.

U Bergthorsson1, H Ochman.   

Abstract

Short-term rates of chromosome evolution were analyzed in experimental populations of Escherichia coli B that had been propagated for 2,000 generations under four thermal regimens. Chromosome alterations were monitored in 24 independent populations by pulsed-field gel electrophoresis of DNA treated with five rare-cutting restriction enzymes. A total of 11 changes, 8 affecting chromosome size and 3 altering restriction sites, were observed in these populations, with none occurring in strains cultured at 37 degreesC. Considering the changes detected in these experimental populations, the rate of chromosome alteration of E. coli is estimated to be half of that observed in experimental populations of yeast.

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Year:  1999        PMID: 9973369      PMCID: PMC93520     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  20 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-15       Impact factor: 11.205

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Journal:  Biochimie       Date:  1991-04       Impact factor: 4.079

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Journal:  Annu Rev Microbiol       Date:  1977       Impact factor: 15.500

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Journal:  Genetics       Date:  1974-06       Impact factor: 4.562

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Journal:  Microbios       Date:  1982

Review 7.  Organization of the bacterial chromosome.

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Journal:  Microbiol Rev       Date:  1990-12

8.  Adaptation and major chromosomal changes in populations of Saccharomyces cerevisiae.

Authors:  J Adams; S Puskas-Rozsa; J Simlar; C M Wilke
Journal:  Curr Genet       Date:  1992-07       Impact factor: 3.886

9.  Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons.

Authors:  P Anderson; J Roth
Journal:  Proc Natl Acad Sci U S A       Date:  1981-05       Impact factor: 11.205

10.  Transposable elements as mutator genes in evolution.

Authors:  L Chao; C Vargas; B B Spear; E C Cox
Journal:  Nature       Date:  1983 Jun 16-22       Impact factor: 49.962

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  10 in total

Review 1.  Role of genomic typing in taxonomy, evolutionary genetics, and microbial epidemiology.

Authors:  A van Belkum; M Struelens; A de Visser; H Verbrugh; M Tibayrenc
Journal:  Clin Microbiol Rev       Date:  2001-07       Impact factor: 26.132

2.  Combining two genomes in one cell: stable cloning of the Synechocystis PCC6803 genome in the Bacillus subtilis 168 genome.

Authors:  Mitsuhiro Itaya; Kenji Tsuge; Maki Koizumi; Kyoko Fujita
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-18       Impact factor: 11.205

3.  Ohno's dilemma: evolution of new genes under continuous selection.

Authors:  Ulfar Bergthorsson; Dan I Andersson; John R Roth
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-17       Impact factor: 11.205

4.  Specificity of genome evolution in experimental populations of Escherichia coli evolved at different temperatures.

Authors:  Daniel E Deatherage; Jamie L Kepner; Albert F Bennett; Richard E Lenski; Jeffrey E Barrick
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-15       Impact factor: 11.205

5.  Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution.

Authors:  Toshihiko Kishimoto; Leo Iijima; Makoto Tatsumi; Naoaki Ono; Ayana Oyake; Tomomi Hashimoto; Moe Matsuo; Masato Okubo; Shingo Suzuki; Kotaro Mori; Akiko Kashiwagi; Chikara Furusawa; Bei-Wen Ying; Tetsuya Yomo
Journal:  PLoS Genet       Date:  2010-10-21       Impact factor: 5.917

6.  Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae.

Authors:  Maitreya J Dunham; Hassan Badrane; Tracy Ferea; Julian Adams; Patrick O Brown; Frank Rosenzweig; David Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-21       Impact factor: 11.205

7.  Genetic architecture of thermal adaptation in Escherichia coli.

Authors:  M M Riehle; A F Bennett; A D Long
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-09       Impact factor: 11.205

8.  Short-term genome evolution of Listeria monocytogenes in a non-controlled environment.

Authors:  Renato H Orsi; Mark L Borowsky; Peter Lauer; Sarah K Young; Chad Nusbaum; James E Galagan; Bruce W Birren; Reid A Ivy; Qi Sun; Lewis M Graves; Bala Swaminathan; Martin Wiedmann
Journal:  BMC Genomics       Date:  2008-11-13       Impact factor: 3.969

9.  Carbon and nitrogen substrate utilization by archival Salmonella typhimurium LT2 cells.

Authors:  Breca S Tracy; Kelly K Edwards; Abraham Eisenstark
Journal:  BMC Evol Biol       Date:  2002-09-08       Impact factor: 3.260

10.  Rapid Increase in frequency of gene copy-number variants during experimental evolution in Caenorhabditis elegans.

Authors:  James C Farslow; Kendra J Lipinski; Lucille B Packard; Mark L Edgley; Jon Taylor; Stephane Flibotte; Donald G Moerman; Vaishali Katju; Ulfar Bergthorsson
Journal:  BMC Genomics       Date:  2015-12-09       Impact factor: 3.969

  10 in total

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